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The map label for this gene is ugpA [C]

Identifier: 119715540

GI number: 119715540

Start: 1378428

End: 1379324

Strand: Direct

Name: ugpA [C]

Synonym: Noca_1304

Alternate gene names: 119715540

Gene position: 1378428-1379324 (Clockwise)

Preceding gene: 119715539

Following gene: 119715541

Centisome position: 27.65

GC content: 66.11

Gene sequence:

>897_bases
GTGAACCGAGGCTGGCGATCGTGGGGCCCCCCGGTCCTGCTGATCCTCCCGTCCCTGATCCTGATCGGGGTCTTCGTCTA
CGGCCTGATCGGCGTCAACTTCAACACCTCGTTGACCGACCAGCACCACCGCATCGGCGGTGACGTCGCGTACGTCGGGT
TCGACAACTACAAGACGCTGTTCCAGGACGACACGTTCGTCTACTCGCTCAAGAACCTGCTCAAGTACACCGGTGCCTTC
CTCGTCGGCACCCTGGTGATGGGCTTCATCTGGGCCTGGCTCCTGGAGAAGGGCGTGAAGGGCGAGGGGTTCTTCCGCGC
CGTCTACCTCTTCCCGATGGCGGTCTCGTTCATCGCCTCCGGTGTGGTGTGGCGCTGGCTGCTCAACAACGCCGAGGGCG
ACCGGGCCGGCGGCCTCAACCGGCTCTTCGACCAGGTCGGGCTCGGGTTCCTCCAGAACCAGTGGTGGACCGACCCCCAA
TGGGGTGTCGTCGCCATCGCGCTCCCCGCGATCTGGCAGCTGTCGGGCTACGTGATGGCGCTCTTCCTCGCGGGCTTCCG
CGGGATCCCCGACGAGCTGCGCGAGGCGGCCCGGGTCGACGGCGCCTCGGAGTGGCAGCTCTACCGCCACGTGATCTTCC
CCCAGCTCAGCCCGGTCGCGCTCTCGGCCATCGTGATCGTCGGCCACATGTCGCTGAAGGTCTTCGACCTGATCATGGCG
ATCGCGGGCCAGACGAACTACACGACCCAGGTGCCGGCCATCCAGATGTGGGTCGAGTTCACCCGCGGTGACTACGCCCG
CTCCGCGGCGATCGGCACGATCCTGCTCGTGATCGTGGCGTTCCTGATCATCCCCTACCTCGTCTACACCTACCGGCAGG
AGCGGCTGACCCGATGA

Upstream 100 bases:

>100_bases
AAGAACGCCGGCTGATCTCCGGCTCGGTCGGCCCGGCCCCGCGGGGTCGGGCCGACCGGTACCCGCCACGTGGTCAGGCA
ACGGCGAGAAGGAGTGCATG

Downstream 100 bases:

>100_bases
GCACCACGGCTCTTCCCACGGCCGACACCGTCCTCGCGCCCTCCGGCCGGCGCTCGGACCGCACCGGCGGGTCCACGGCG
ATGCGCACCGTGCGGTACGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNRGWRSWGPPVLLILPSLILIGVFVYGLIGVNFNTSLTDQHHRIGGDVAYVGFDNYKTLFQDDTFVYSLKNLLKYTGAF
LVGTLVMGFIWAWLLEKGVKGEGFFRAVYLFPMAVSFIASGVVWRWLLNNAEGDRAGGLNRLFDQVGLGFLQNQWWTDPQ
WGVVAIALPAIWQLSGYVMALFLAGFRGIPDELREAARVDGASEWQLYRHVIFPQLSPVALSAIVIVGHMSLKVFDLIMA
IAGQTNYTTQVPAIQMWVEFTRGDYARSAAIGTILLVIVAFLIIPYLVYTYRQERLTR

Sequences:

>Translated_298_residues
MNRGWRSWGPPVLLILPSLILIGVFVYGLIGVNFNTSLTDQHHRIGGDVAYVGFDNYKTLFQDDTFVYSLKNLLKYTGAF
LVGTLVMGFIWAWLLEKGVKGEGFFRAVYLFPMAVSFIASGVVWRWLLNNAEGDRAGGLNRLFDQVGLGFLQNQWWTDPQ
WGVVAIALPAIWQLSGYVMALFLAGFRGIPDELREAARVDGASEWQLYRHVIFPQLSPVALSAIVIVGHMSLKVFDLIMA
IAGQTNYTTQVPAIQMWVEFTRGDYARSAAIGTILLVIVAFLIIPYLVYTYRQERLTR
>Mature_298_residues
MNRGWRSWGPPVLLILPSLILIGVFVYGLIGVNFNTSLTDQHHRIGGDVAYVGFDNYKTLFQDDTFVYSLKNLLKYTGAF
LVGTLVMGFIWAWLLEKGVKGEGFFRAVYLFPMAVSFIASGVVWRWLLNNAEGDRAGGLNRLFDQVGLGFLQNQWWTDPQ
WGVVAIALPAIWQLSGYVMALFLAGFRGIPDELREAARVDGASEWQLYRHVIFPQLSPVALSAIVIVGHMSLKVFDLIMA
IAGQTNYTTQVPAIQMWVEFTRGDYARSAAIGTILLVIVAFLIIPYLVYTYRQERLTR

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=26.6891891891892, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33525; Mature: 33525

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRGWRSWGPPVLLILPSLILIGVFVYGLIGVNFNTSLTDQHHRIGGDVAYVGFDNYKTL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCHHH
FQDDTFVYSLKNLLKYTGAFLVGTLVMGFIWAWLLEKGVKGEGFFRAVYLFPMAVSFIAS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GVVWRWLLNNAEGDRAGGLNRLFDQVGLGFLQNQWWTDPQWGVVAIALPAIWQLSGYVMA
HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LFLAGFRGIPDELREAARVDGASEWQLYRHVIFPQLSPVALSAIVIVGHMSLKVFDLIMA
HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAGQTNYTTQVPAIQMWVEFTRGDYARSAAIGTILLVIVAFLIIPYLVYTYRQERLTR
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRGWRSWGPPVLLILPSLILIGVFVYGLIGVNFNTSLTDQHHRIGGDVAYVGFDNYKTL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCHHH
FQDDTFVYSLKNLLKYTGAFLVGTLVMGFIWAWLLEKGVKGEGFFRAVYLFPMAVSFIAS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GVVWRWLLNNAEGDRAGGLNRLFDQVGLGFLQNQWWTDPQWGVVAIALPAIWQLSGYVMA
HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LFLAGFRGIPDELREAARVDGASEWQLYRHVIFPQLSPVALSAIVIVGHMSLKVFDLIMA
HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IAGQTNYTTQVPAIQMWVEFTRGDYARSAAIGTILLVIVAFLIIPYLVYTYRQERLTR
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]