| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715512
Identifier: 119715512
GI number: 119715512
Start: 1350212
End: 1350673
Strand: Direct
Name: 119715512
Synonym: Noca_1276
Alternate gene names: NA
Gene position: 1350212-1350673 (Clockwise)
Preceding gene: 119715511
Following gene: 119715514
Centisome position: 27.08
GC content: 69.91
Gene sequence:
>462_bases ATGACGATCGAGCGCCGCCTCGCCCACGCCGGATTCACCCTGACCCGCGACTACCCCGTTCCCGTCGAGCGGGTCTGGGC TGCGTTCGCCGAGGAGGACCAGAAGCGCGCCTGGTTCGGTGAAGGCGATGCCTACGAGGCCGGCGAGTGGGCCTTCGACT TCCGCATCGGCGGTCAGGACGTCGCCGAGGGGTCCTTCCACGACGGGCCGGTCTCGCGGTACGTCGCGACGTACACCGAC ATCGTCGAGCAGGTCCGGATCGTGACGACGTACGACATGTGGCTCGACGGGGTGCACATGTCGACCTCCGTGGCCACGCT GGAGCTCGAGCCGGTCGCCGGCGGCACCAGGTTCACCCACGTCGAGCACGGCGTCTTCTTCGACCGGTTCGTGGCCGACG CCCCCCAGCGAGAGGCGGGCAGCAGGGGACTGCTCGACGTCCTGGCCCGGCACCTCGCCTGA
Upstream 100 bases:
>100_bases GGGACGACCTGCGTGGCCTGGACCGCACCCACCGGGTGACGAGCGAGGTGGCGGAGAGCGGCACCGTCCACGTCACCTTC GAGCGACAGAGCACCGAGCG
Downstream 100 bases:
>100_bases CGCGAGCCTAGGAAGTGGCCCCGCCCGACGGGTCCGGCTCGTAGCTGCCCTCCGGCGTCTCCACCCGGACCGGCCCGGAG CCTCGCTTGAGGGTCACGGC
Product: activator of Hsp90 ATPase 1 family protein
Products: NA
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTIERRLAHAGFTLTRDYPVPVERVWAAFAEEDQKRAWFGEGDAYEAGEWAFDFRIGGQDVAEGSFHDGPVSRYVATYTD IVEQVRIVTTYDMWLDGVHMSTSVATLELEPVAGGTRFTHVEHGVFFDRFVADAPQREAGSRGLLDVLARHLA
Sequences:
>Translated_153_residues MTIERRLAHAGFTLTRDYPVPVERVWAAFAEEDQKRAWFGEGDAYEAGEWAFDFRIGGQDVAEGSFHDGPVSRYVATYTD IVEQVRIVTTYDMWLDGVHMSTSVATLELEPVAGGTRFTHVEHGVFFDRFVADAPQREAGSRGLLDVLARHLA >Mature_152_residues TIERRLAHAGFTLTRDYPVPVERVWAAFAEEDQKRAWFGEGDAYEAGEWAFDFRIGGQDVAEGSFHDGPVSRYVATYTDI VEQVRIVTTYDMWLDGVHMSTSVATLELEPVAGGTRFTHVEHGVFFDRFVADAPQREAGSRGLLDVLARHLA
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17166; Mature: 17035
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIERRLAHAGFTLTRDYPVPVERVWAAFAEEDQKRAWFGEGDAYEAGEWAFDFRIGGQD CCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC VAEGSFHDGPVSRYVATYTDIVEQVRIVTTYDMWLDGVHMSTSVATLELEPVAGGTRFTH CCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCEECCCEEEEEEEEECCCCCEEEE VEHGVFFDRFVADAPQREAGSRGLLDVLARHLA ECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TIERRLAHAGFTLTRDYPVPVERVWAAFAEEDQKRAWFGEGDAYEAGEWAFDFRIGGQD CHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC VAEGSFHDGPVSRYVATYTDIVEQVRIVTTYDMWLDGVHMSTSVATLELEPVAGGTRFTH CCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCEECCCEEEEEEEEECCCCCEEEE VEHGVFFDRFVADAPQREAGSRGLLDVLARHLA ECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA