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The map label for this gene is 119715467

Identifier: 119715467

GI number: 119715467

Start: 1307960

End: 1308550

Strand: Reverse

Name: 119715467

Synonym: Noca_1231

Alternate gene names: NA

Gene position: 1308550-1307960 (Counterclockwise)

Preceding gene: 119715469

Following gene: 119715466

Centisome position: 26.25

GC content: 72.93

Gene sequence:

>591_bases
ATGAGCAAGGGCACCGAGACCCGTGCCGCGATCCTCGACGAGGCGGCCGACCTGGCCTCCCGCGTGGGCCTGGGCGGGCT
GACGATCGGCACCCTGGCCACCCAGACCGGGCTGTCCAAGAGCGGCCTGTTCGGCCACTTCTCCTCCAAGGAGACGCTGC
AGATCGGCGTCCTGGGCCGCGCCCGGGAGCGCTTCGTCGACCGGGTGCTGCGGCCCACCGTCGCCACCCCCCGCGGAGAG
CAGCGGGTCCGCGCGCTCTTCGAGCACTGGCTGGCCTGGCAGCAGGGCGGCCTCGCCGGTGGCTGCCTGTTCGTCGACGC
CGTGAGCGAGTTCGACGACCAGGACGGCCCGGTCCGCGAGGAGCTGCTCCGCTCGGAGCGTGACAAGGCCGAGTCCGTGA
TGACGATCGTGGCCACGGCGGTCGCCGAGGGCGACTTCGCCGCCGACCTCGACCTCGAGCAGTTCGCCTTCGAGCTCGAA
GGGATCATGCTCACCCACCACCACAGCTGCCGGATGCTGCGCGTCCCCGACGCCACCGACCGCGCCCGCACCGCCTTCGA
GCGGCTCGTCGAGTCGGCCCGCCCGCGCTGA

Upstream 100 bases:

>100_bases
CGTGGCGAGCAGCAGTCCCATGGGCCAGGACCGTAGCGGAGCCGGACGCACGAGGCGCGCGGGCGTTGACACGTCCGAAC
GGTCGTGCTTTTCTTGGGTC

Downstream 100 bases:

>100_bases
CCCCACCGCCCCGGACCCACCACCGCCCCATCCCCCGAGAGGAACCGCCATGGCATCGTCAGGCGCTCAGAAACGCACGA
TCGTTCGTTCTATTATCCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSKGTETRAAILDEAADLASRVGLGGLTIGTLATQTGLSKSGLFGHFSSKETLQIGVLGRARERFVDRVLRPTVATPRGE
QRVRALFEHWLAWQQGGLAGGCLFVDAVSEFDDQDGPVREELLRSERDKAESVMTIVATAVAEGDFAADLDLEQFAFELE
GIMLTHHHSCRMLRVPDATDRARTAFERLVESARPR

Sequences:

>Translated_196_residues
MSKGTETRAAILDEAADLASRVGLGGLTIGTLATQTGLSKSGLFGHFSSKETLQIGVLGRARERFVDRVLRPTVATPRGE
QRVRALFEHWLAWQQGGLAGGCLFVDAVSEFDDQDGPVREELLRSERDKAESVMTIVATAVAEGDFAADLDLEQFAFELE
GIMLTHHHSCRMLRVPDATDRARTAFERLVESARPR
>Mature_195_residues
SKGTETRAAILDEAADLASRVGLGGLTIGTLATQTGLSKSGLFGHFSSKETLQIGVLGRARERFVDRVLRPTVATPRGEQ
RVRALFEHWLAWQQGGLAGGCLFVDAVSEFDDQDGPVREELLRSERDKAESVMTIVATAVAEGDFAADLDLEQFAFELEG
IMLTHHHSCRMLRVPDATDRARTAFERLVESARPR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21468; Mature: 21336

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGTETRAAILDEAADLASRVGLGGLTIGTLATQTGLSKSGLFGHFSSKETLQIGVLGR
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHH
ARERFVDRVLRPTVATPRGEQRVRALFEHWLAWQQGGLAGGCLFVDAVSEFDDQDGPVRE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHH
ELLRSERDKAESVMTIVATAVAEGDFAADLDLEQFAFELEGIMLTHHHSCRMLRVPDATD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEECCCEEEEECCCCCH
RARTAFERLVESARPR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKGTETRAAILDEAADLASRVGLGGLTIGTLATQTGLSKSGLFGHFSSKETLQIGVLGR
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHH
ARERFVDRVLRPTVATPRGEQRVRALFEHWLAWQQGGLAGGCLFVDAVSEFDDQDGPVRE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHH
ELLRSERDKAESVMTIVATAVAEGDFAADLDLEQFAFELEGIMLTHHHSCRMLRVPDATD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEECCCEEEEECCCCCH
RARTAFERLVESARPR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA