| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715466
Identifier: 119715466
GI number: 119715466
Start: 1307023
End: 1307910
Strand: Reverse
Name: 119715466
Synonym: Noca_1230
Alternate gene names: NA
Gene position: 1307910-1307023 (Counterclockwise)
Preceding gene: 119715467
Following gene: 119715459
Centisome position: 26.23
GC content: 74.89
Gene sequence:
>888_bases ATGGCATCGTCAGGCGCTCAGAAACGCACGATCGTTCGTTCTATTATCCGGATTGGCTTCGGGCTGCTCGACCGGGTGGC GCCGGGGCTCGGCGCCCGGCTCGTGATCCGGATCTGGTTCCGGATCCCGCGCGGCATGCCGCTGGTCGCGCCGACCGGCG CCCCGTTCGAGGTGCGCTGGCAGGGCCGCACCCTGCGCGGTCAGGTCTGGGGCGAGGGTCCGCCGGTCTACCTGGTGCAC GGCTGGGGCGGCAACGGCGACCAGATGCGGCACTTCGTCGAGCCGCTGGTCGCCGCCGGGCACCGGGTCGTGGCGTACGA CGGGCCCTCCCACGGCCGCTCGGACGCGGGCCGGCACGGTCCGGAGACGACCGACGCGGTCGAGCTCGCCCAGGCCCTGG ACGCCGTGGTCGCGGAGTTCGGCCCGGCGCGGGCGGTCGTGGCCCACTCGCTCGGCACGCTCTCCCTGCTCCTCGCCCTG CGGGACGGCTGGTTCACCGCCGAACGGGTGGTGCTCGTCGCGCCCGTGGACGGCGTCCCGGGGTTCACGGCGTACTTCCG CCGGCTCCTCGGCTTCGGCGACCGGGTCCAGCGGCACACCGAGCGGCTGGTCGAGGAGCGGACGGGCTACCGCCCCGACG AGCTCCAGACGCTGCTGCTCGCCGAGCGTCCGGGCCTGCCCGAGGCGCTGGTCGTGCAGGACCGCGACGACCGCAGCGTC GGCACCGGTCTCGCCCGCGAGCTCGCCGCCGGCTGGCCGGGCGCGACGTACCTGGAGACCCGCGGCCTGGGCCACAGCCG GGTGCTGGCCGATCCTGACGTCGTCGCGAGCGTGGTGCGGTTCGTGGCCGACGAGGTGGCCGATGCCCGTGACGAGCTCG CCTCCTGA
Upstream 100 bases:
>100_bases CGCGCCCGCACCGCCTTCGAGCGGCTCGTCGAGTCGGCCCGCCCGCGCTGACCCCACCGCCCCGGACCCACCACCGCCCC ATCCCCCGAGAGGAACCGCC
Downstream 100 bases:
>100_bases GCCGCCCCTGGGCTCAGCGCCGGTTCCGGTTTCCCCGGTTCACCGGGGAAGTTGGAACTTCTGGCCCGAAACTTCGGCCC AACAGTTCCGGTTTCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Protein; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase; Esterase/Lipase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MASSGAQKRTIVRSIIRIGFGLLDRVAPGLGARLVIRIWFRIPRGMPLVAPTGAPFEVRWQGRTLRGQVWGEGPPVYLVH GWGGNGDQMRHFVEPLVAAGHRVVAYDGPSHGRSDAGRHGPETTDAVELAQALDAVVAEFGPARAVVAHSLGTLSLLLAL RDGWFTAERVVLVAPVDGVPGFTAYFRRLLGFGDRVQRHTERLVEERTGYRPDELQTLLLAERPGLPEALVVQDRDDRSV GTGLARELAAGWPGATYLETRGLGHSRVLADPDVVASVVRFVADEVADARDELAS
Sequences:
>Translated_295_residues MASSGAQKRTIVRSIIRIGFGLLDRVAPGLGARLVIRIWFRIPRGMPLVAPTGAPFEVRWQGRTLRGQVWGEGPPVYLVH GWGGNGDQMRHFVEPLVAAGHRVVAYDGPSHGRSDAGRHGPETTDAVELAQALDAVVAEFGPARAVVAHSLGTLSLLLAL RDGWFTAERVVLVAPVDGVPGFTAYFRRLLGFGDRVQRHTERLVEERTGYRPDELQTLLLAERPGLPEALVVQDRDDRSV GTGLARELAAGWPGATYLETRGLGHSRVLADPDVVASVVRFVADEVADARDELAS >Mature_294_residues ASSGAQKRTIVRSIIRIGFGLLDRVAPGLGARLVIRIWFRIPRGMPLVAPTGAPFEVRWQGRTLRGQVWGEGPPVYLVHG WGGNGDQMRHFVEPLVAAGHRVVAYDGPSHGRSDAGRHGPETTDAVELAQALDAVVAEFGPARAVVAHSLGTLSLLLALR DGWFTAERVVLVAPVDGVPGFTAYFRRLLGFGDRVQRHTERLVEERTGYRPDELQTLLLAERPGLPEALVVQDRDDRSVG TGLARELAAGWPGATYLETRGLGHSRVLADPDVVASVVRFVADEVADARDELAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31921; Mature: 31790
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSGAQKRTIVRSIIRIGFGLLDRVAPGLGARLVIRIWFRIPRGMPLVAPTGAPFEVRW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE QGRTLRGQVWGEGPPVYLVHGWGGNGDQMRHFVEPLVAAGHRVVAYDGPSHGRSDAGRHG CCCEEECEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC PETTDAVELAQALDAVVAEFGPARAVVAHSLGTLSLLLALRDGWFTAERVVLVAPVDGVP CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC GFTAYFRRLLGFGDRVQRHTERLVEERTGYRPDELQTLLLAERPGLPEALVVQDRDDRSV CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH GTGLARELAAGWPGATYLETRGLGHSRVLADPDVVASVVRFVADEVADARDELAS HHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASSGAQKRTIVRSIIRIGFGLLDRVAPGLGARLVIRIWFRIPRGMPLVAPTGAPFEVRW CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE QGRTLRGQVWGEGPPVYLVHGWGGNGDQMRHFVEPLVAAGHRVVAYDGPSHGRSDAGRHG CCCEEECEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC PETTDAVELAQALDAVVAEFGPARAVVAHSLGTLSLLLALRDGWFTAERVVLVAPVDGVP CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC GFTAYFRRLLGFGDRVQRHTERLVEERTGYRPDELQTLLLAERPGLPEALVVQDRDDRSV CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHH GTGLARELAAGWPGATYLETRGLGHSRVLADPDVVASVVRFVADEVADARDELAS HHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA