| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is mpaA [H]
Identifier: 119715440
GI number: 119715440
Start: 1278286
End: 1279074
Strand: Direct
Name: mpaA [H]
Synonym: Noca_1204
Alternate gene names: 119715440
Gene position: 1278286-1279074 (Clockwise)
Preceding gene: 119715439
Following gene: 119715443
Centisome position: 25.64
GC content: 71.48
Gene sequence:
>789_bases ATGATCCGGCCCGATGTTCTAGGGTCGGTGCCCATGCGTCTCGGGACCCTGCTCGCCACCGCCCTCACCGTCACCCTCGC CACCGGGCTGCTCGCCGGCGTGCCGACGGCGTCGTACGCCGTGCGCGCCCCCGACGACCGGCCGGCCGTCAAGGAGGTCC GGGTGATCGGGCACTCCGTGCGGGGCCGGCCGATCAAGGCCTTCCGGCTCGGGGAGCGCGGCCGGCCGAAGGCGCTGCTG ATCTCCACCATGCACGGCAACGAGGGCCACCCCCGGCAGATCCTCGCCACGCTGCGCGACGGCCGGCCGATCCACGGGCT CAACCTGTGGGTGCTGCCGATCTACAACCCCGACGGGCTCGCGCGGCACACCCGCAAGAACGCCCACGGCGTCGACCTCA ACCGCAACTTCCCCTACCGCTGGGCCGACCTCGACGGCAGCTACGAGTCCGGGCCGCGGCCCGGCTCCGAGCCGGAGACC CGAGCGGTGATGAAGTTCCTGAAGCAGATCAAGCCGCGCTGGATCGTCAGCTTCCACCAGCCGCTGCACGGCGTCGACAC CGACACCAAGAACGCGCGGTTCTCCCGGCGGGTCGCCGACAAGCTGAACCTGCCGCGCAAGTCCTTCACCTGCGGCGGCG TCTGCCACGGCACGATGACCGGCTGGTACAACCACCAGTTCCGGGGCTCGGCGCTGACCGTCGAGTACGGCGCGCACCCG TCCACGCGGCTGATGCGCAGGATCGCGCCGAAGCAGGTGCTCTCCATCTGGGGTGCCCGGCGGGGTTGA
Upstream 100 bases:
>100_bases AGGGGCCGGGGCTCTCGATCCTGGCGCACGTCGGGATGCTCGTCGGCGTCGGCGTCTTCACCTGGGCCTACCTCACCGCC GCGGTCTGACCGGCGCGCGG
Downstream 100 bases:
>100_bases GTCGCCCCCGAGCGACGGGGTCCCGGCCCGGCTCACCGACCCCTGGACACCGGTTCACCGGCCCTCGAACACCGGCTTCT GCTTGGCGACGAAGGCGGCG
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIRPDVLGSVPMRLGTLLATALTVTLATGLLAGVPTASYAVRAPDDRPAVKEVRVIGHSVRGRPIKAFRLGERGRPKALL ISTMHGNEGHPRQILATLRDGRPIHGLNLWVLPIYNPDGLARHTRKNAHGVDLNRNFPYRWADLDGSYESGPRPGSEPET RAVMKFLKQIKPRWIVSFHQPLHGVDTDTKNARFSRRVADKLNLPRKSFTCGGVCHGTMTGWYNHQFRGSALTVEYGAHP STRLMRRIAPKQVLSIWGARRG
Sequences:
>Translated_262_residues MIRPDVLGSVPMRLGTLLATALTVTLATGLLAGVPTASYAVRAPDDRPAVKEVRVIGHSVRGRPIKAFRLGERGRPKALL ISTMHGNEGHPRQILATLRDGRPIHGLNLWVLPIYNPDGLARHTRKNAHGVDLNRNFPYRWADLDGSYESGPRPGSEPET RAVMKFLKQIKPRWIVSFHQPLHGVDTDTKNARFSRRVADKLNLPRKSFTCGGVCHGTMTGWYNHQFRGSALTVEYGAHP STRLMRRIAPKQVLSIWGARRG >Mature_262_residues MIRPDVLGSVPMRLGTLLATALTVTLATGLLAGVPTASYAVRAPDDRPAVKEVRVIGHSVRGRPIKAFRLGERGRPKALL ISTMHGNEGHPRQILATLRDGRPIHGLNLWVLPIYNPDGLARHTRKNAHGVDLNRNFPYRWADLDGSYESGPRPGSEPET RAVMKFLKQIKPRWIVSFHQPLHGVDTDTKNARFSRRVADKLNLPRKSFTCGGVCHGTMTGWYNHQFRGSALTVEYGAHP STRLMRRIAPKQVLSIWGARRG
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510938, Length=164, Percent_Identity=35.3658536585366, Blast_Score=87, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 29134; Mature: 29134
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPDVLGSVPMRLGTLLATALTVTLATGLLAGVPTASYAVRAPDDRPAVKEVRVIGHSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHC RGRPIKAFRLGERGRPKALLISTMHGNEGHPRQILATLRDGRPIHGLNLWVLPIYNPDGL CCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCH ARHTRKNAHGVDLNRNFPYRWADLDGSYESGPRPGSEPETRAVMKFLKQIKPRWIVSFHQ HHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC PLHGVDTDTKNARFSRRVADKLNLPRKSFTCGGVCHGTMTGWYNHQFRGSALTVEYGAHP CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEECCCEEEEEECCCC STRLMRRIAPKQVLSIWGARRG HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIRPDVLGSVPMRLGTLLATALTVTLATGLLAGVPTASYAVRAPDDRPAVKEVRVIGHSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHC RGRPIKAFRLGERGRPKALLISTMHGNEGHPRQILATLRDGRPIHGLNLWVLPIYNPDGL CCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCH ARHTRKNAHGVDLNRNFPYRWADLDGSYESGPRPGSEPETRAVMKFLKQIKPRWIVSFHQ HHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC PLHGVDTDTKNARFSRRVADKLNLPRKSFTCGGVCHGTMTGWYNHQFRGSALTVEYGAHP CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEECCCEEEEEECCCC STRLMRRIAPKQVLSIWGARRG HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]