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The map label for this gene is dapL [H]

Identifier: 119715429

GI number: 119715429

Start: 1267033

End: 1267890

Strand: Direct

Name: dapL [H]

Synonym: Noca_1193

Alternate gene names: 119715429

Gene position: 1267033-1267890 (Clockwise)

Preceding gene: 119715428

Following gene: 119715433

Centisome position: 25.41

GC content: 73.66

Gene sequence:

>858_bases
GTGACCTGCTTCGACACGGCGGACGGCACCGTGCTGCCGGTGATCGGCACCAAGGAGCTGATCGCCTCGATGCCGGTCCA
CCTCGGCCTCGGCCCCGGTGACCTGGTCGTCTACCCCGAGCTGGCCTACCCGACGTACGAGGTCGGCGCGGCGCTCGCCG
GCGCGCGCGCCCTCGCCAGGGACTCGCTGACCTCCCTCGGCCCGGAGCGGCCCGCGCTGCTCTGGCTGAACTCCCCGTCG
AACCCGACCGGCCGGGTGCTGCCGCCCGAGCACCTGAAGAAGGTCGTCGACTGGTGCCGCGAGCGCGGCACGATCCTGGT
CTCCGATGAGTGCTACCTGGAGTGCGCCTGGGAGGACCGGCCGGTCTCCGTGCTGCACCCGAAGGTCTCGGGCGGCTCCG
CTGAGGGCATCCTCGCAGTGCACTCGCTCTCCAAGCGCTCCAACCTGGCGGGCTACCGGTGCGGCTTCGTGGCCGGCGAC
ACCGCACTCATCGGGGAGCTGCTCGCGGTGCGCAAGAACCTCGGGCTGATGCTGCCCGGCCCGCAGCAGGTCGCGATGAA
GGCCGCGCTCGACGACGACGCGCACGCCCTGGAGCAGCACGCCCGCTACGCCGCCCGCCGAGCCAAGCTGCGCGACGCAC
TGCTCGGCGCCGGCTTCACCATCGAGCACTCCGAGGCGTCGCTGTACCTGTGGGCCACCCGCGACGAGGACTGCTGGGAG
ACCGTGTCCTGGCTGGCCGAGCGCGGCGTCCTGGTCGCCCCGGGCGCGTTCTACGGCCGCGCCGGCGGCCGCCACGTGCG
GGTCGCCTTCACCGCCACCGACGAGCGGGTCGACGCCGCGGTCGCCCGGCTGGCCTGA

Upstream 100 bases:

>100_bases
GGCGCTGCGCGCCGCGGCGGACTCGCCGGGCTACCCGCAGACCGCCGGCCGAGCCGACCTGCGGGAGTCCTGCCTGGACT
GGCTGGCCCGCCGGCACGGC

Downstream 100 bases:

>100_bases
CCCGGCAGCCCCGTCCCCCCACCGGCTGGCCTTCGCGGTAGTCCCTGACGATTGCGCGGTTGGGAGCGCTCCCGGACCAC
GCAATCGTCAGGGACTACCG

Product: N-succinyldiaminopimelate aminotransferase

Products: NA

Alternate protein names: DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTCFDTADGTVLPVIGTKELIASMPVHLGLGPGDLVVYPELAYPTYEVGAALAGARALARDSLTSLGPERPALLWLNSPS
NPTGRVLPPEHLKKVVDWCRERGTILVSDECYLECAWEDRPVSVLHPKVSGGSAEGILAVHSLSKRSNLAGYRCGFVAGD
TALIGELLAVRKNLGLMLPGPQQVAMKAALDDDAHALEQHARYAARRAKLRDALLGAGFTIEHSEASLYLWATRDEDCWE
TVSWLAERGVLVAPGAFYGRAGGRHVRVAFTATDERVDAAVARLA

Sequences:

>Translated_285_residues
MTCFDTADGTVLPVIGTKELIASMPVHLGLGPGDLVVYPELAYPTYEVGAALAGARALARDSLTSLGPERPALLWLNSPS
NPTGRVLPPEHLKKVVDWCRERGTILVSDECYLECAWEDRPVSVLHPKVSGGSAEGILAVHSLSKRSNLAGYRCGFVAGD
TALIGELLAVRKNLGLMLPGPQQVAMKAALDDDAHALEQHARYAARRAKLRDALLGAGFTIEHSEASLYLWATRDEDCWE
TVSWLAERGVLVAPGAFYGRAGGRHVRVAFTATDERVDAAVARLA
>Mature_284_residues
TCFDTADGTVLPVIGTKELIASMPVHLGLGPGDLVVYPELAYPTYEVGAALAGARALARDSLTSLGPERPALLWLNSPSN
PTGRVLPPEHLKKVVDWCRERGTILVSDECYLECAWEDRPVSVLHPKVSGGSAEGILAVHSLSKRSNLAGYRCGFVAGDT
ALIGELLAVRKNLGLMLPGPQQVAMKAALDDDAHALEQHARYAARRAKLRDALLGAGFTIEHSEASLYLWATRDEDCWET
VSWLAERGVLVAPGAFYGRAGGRHVRVAFTATDERVDAAVARLA

Specific function: Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788722, Length=287, Percent_Identity=29.616724738676, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR019881
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.83 [H]

Molecular weight: Translated: 30576; Mature: 30445

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCFDTADGTVLPVIGTKELIASMPVHLGLGPGDLVVYPELAYPTYEVGAALAGARALAR
CCCEECCCCEEEEEECHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
DSLTSLGPERPALLWLNSPSNPTGRVLPPEHLKKVVDWCRERGTILVSDECYLECAWEDR
HHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEECCCC
PVSVLHPKVSGGSAEGILAVHSLSKRSNLAGYRCGFVAGDTALIGELLAVRKNLGLMLPG
CCEEEECCCCCCCCCCEEEEEHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEECCC
PQQVAMKAALDDDAHALEQHARYAARRAKLRDALLGAGFTIEHSEASLYLWATRDEDCWE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHH
TVSWLAERGVLVAPGAFYGRAGGRHVRVAFTATDERVDAAVARLA
HHHHHHHCCEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
TCFDTADGTVLPVIGTKELIASMPVHLGLGPGDLVVYPELAYPTYEVGAALAGARALAR
CCEECCCCEEEEEECHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
DSLTSLGPERPALLWLNSPSNPTGRVLPPEHLKKVVDWCRERGTILVSDECYLECAWEDR
HHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEECCCC
PVSVLHPKVSGGSAEGILAVHSLSKRSNLAGYRCGFVAGDTALIGELLAVRKNLGLMLPG
CCEEEECCCCCCCCCCEEEEEHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEECCC
PQQVAMKAALDDDAHALEQHARYAARRAKLRDALLGAGFTIEHSEASLYLWATRDEDCWE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHH
TVSWLAERGVLVAPGAFYGRAGGRHVRVAFTATDERVDAAVARLA
HHHHHHHCCEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA