| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715382
Identifier: 119715382
GI number: 119715382
Start: 1215108
End: 1215599
Strand: Reverse
Name: 119715382
Synonym: Noca_1144
Alternate gene names: NA
Gene position: 1215599-1215108 (Counterclockwise)
Preceding gene: 119715384
Following gene: 119715381
Centisome position: 24.38
GC content: 75.41
Gene sequence:
>492_bases GTGCGGGTCGAGGAGTTCAACGCGCTGCCGCCGCACGAGGCGGCGGACACCGTGCGCCCCTGCGCGGACGTCGACTCGTG GATCGAGGCCCTCGTCGCCGGCCGGCCGTACGACGGGGTCGCCGGCCTGATCGCGCTCGCGGACGCCCAGGCGCGGACGT GGACCGGCGCGGAGGTCGAGCACGCGCTCGCGGACCATCCGCGGATCGGCGAGCGGCCCAGCGCGGACGGCGCCAGCGCC GCCATGTCCCGCCGCGAGCAGGGCGGGGTCGCCATCGACAGCGTCCTACGCGAGCGGCTGCGGCGCGGCAACGCGGCGTA CGAGGAGCGGTTCGGCCGGGTCTTCCTGGTGCGTGCCGCCGGGCGCGACGCCGAGGAGATCCTGGCGCTCCTCGAGCAGC GGCTCGCGAACGACCCCGAGACCGAGCTGGCCGTCACCGCGGACCAGCTGCGCGAGATCGCGCTGCTGCGACTGGAAGGA CTGTTCTCATGA
Upstream 100 bases:
>100_bases CGGCTCGACGGGCGCGCGTTTGGACCGTAGCGTCTCGGGACCGGCCGTTCCGGTCAGGCCGGGCGTCGGCAACTCCAGGG TCGTGGACCGAGGAGGGGGA
Downstream 100 bases:
>100_bases CGACGCTGTCCACCCACGTCCTCGACGCCGGGCGCGGGGTGCCGGCCGAGGGCCTCGACGTCCGCCTCGCCGGCCACCTC GTCGCCGGCGACGGCACCCT
Product: putative urate oxidase, N-terminal
Products: NA
Alternate protein names: Bifunctional Allantoicase/OHCU Decarboxylase; Allantoicase; Urate Oxidase N-Terminal; Oxo-4-Hydroxy-4-Carboxy-5-Ureidoimidazoline Decarboxylase; Uricase; Xanthine Permease; Ohcu Decarboxylase; Conserved Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRVEEFNALPPHEAADTVRPCADVDSWIEALVAGRPYDGVAGLIALADAQARTWTGAEVEHALADHPRIGERPSADGASA AMSRREQGGVAIDSVLRERLRRGNAAYEERFGRVFLVRAAGRDAEEILALLEQRLANDPETELAVTADQLREIALLRLEG LFS
Sequences:
>Translated_163_residues MRVEEFNALPPHEAADTVRPCADVDSWIEALVAGRPYDGVAGLIALADAQARTWTGAEVEHALADHPRIGERPSADGASA AMSRREQGGVAIDSVLRERLRRGNAAYEERFGRVFLVRAAGRDAEEILALLEQRLANDPETELAVTADQLREIALLRLEG LFS >Mature_163_residues MRVEEFNALPPHEAADTVRPCADVDSWIEALVAGRPYDGVAGLIALADAQARTWTGAEVEHALADHPRIGERPSADGASA AMSRREQGGVAIDSVLRERLRRGNAAYEERFGRVFLVRAAGRDAEEILALLEQRLANDPETELAVTADQLREIALLRLEG LFS
Specific function: Unknown
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17755; Mature: 17755
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVEEFNALPPHEAADTVRPCADVDSWIEALVAGRPYDGVAGLIALADAQARTWTGAEVE CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHH HALADHPRIGERPSADGASAAMSRREQGGVAIDSVLRERLRRGNAAYEERFGRVFLVRAA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECC GRDAEEILALLEQRLANDPETELAVTADQLREIALLRLEGLFS CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVEEFNALPPHEAADTVRPCADVDSWIEALVAGRPYDGVAGLIALADAQARTWTGAEVE CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHH HALADHPRIGERPSADGASAAMSRREQGGVAIDSVLRERLRRGNAAYEERFGRVFLVRAA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECC GRDAEEILALLEQRLANDPETELAVTADQLREIALLRLEGLFS CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA