| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715328
Identifier: 119715328
GI number: 119715328
Start: 1149566
End: 1150267
Strand: Reverse
Name: 119715328
Synonym: Noca_1089
Alternate gene names: NA
Gene position: 1150267-1149566 (Counterclockwise)
Preceding gene: 119715329
Following gene: 119715327
Centisome position: 23.07
GC content: 71.79
Gene sequence:
>702_bases TTGGGGCGCCAAGCCCGCACGCGGCGAAACGGGACCGAGGAGGCTCCCAAACGCACGCGTGACCGGCTTGCCCGCGCGTG GGAGAGCGGAGCGAGGAAGGTCGCTGAGGCGCCGCGCTGGACTCGCGACCAAGCGCACGAACGTGCCCGAGAGGTCGCCC AAGCGGCGCGAGACCGTGCGGCCGACCCCGACGCCGACCTGACCGACAGCGAGCGGACGTTGCTCGCCGCCGTTGCGACG ATCGCCGATGACCGAGGCAGTGACCGACTGACGCTCCCCCGCGCCGCCCTACTCGAAGCGAGCGGCCTCGGGCTGACGGC CCTGCGCACGGCGCTTCGCCACCTCGACGCCCGGGGGCTGCTCGTGCTTGTCGAGGCAGGGCGCCCTCGCGAGAAGGGTC GGCCCCGGCGGTCGAACGTCTACCGCCTCAACTGCCGACCTAACCCCGAGAGCGGAGTAGGGGTGCCCCCTGCTCTGAGT AGCGGTGCCCCTAGACCGGGCGCCGACGGTGCCCCTGCTCTCGTTAGCGGTGCCCCATCCATCCCTGAGGAGACCGAGGA CATGGACAAGATCGTGCTGACGCGTGAGCAGATTGTGCATGCGCTGGGCGAGGCCGCGCTCGCCGTGCTGGAGGCCCAGC AGGCGCCCGGCGAGATACGCCACCTGCGCGCGGTCGGCGACGTCACGAACGAGGAGCGTTGA
Upstream 100 bases:
>100_bases TCGACTGTTCGGTGCCCTCGTCTCGTCGGCCATGTGGGCACAGCAGCGCGGCTTGAGCGAGGCTGATTGGTGCGGCCTGC TCGCCGAGTCGAGGTCAACG
Downstream 100 bases:
>100_bases CGTGGGCGTCCTCATCGACCTCCGTGGCCGGACGTTCGGCGGGCTGGTCGTCGTCGACCGGGCGGCGACGCGACCGTCGG GCGCGACGTACTGGCGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MGRQARTRRNGTEEAPKRTRDRLARAWESGARKVAEAPRWTRDQAHERAREVAQAARDRAADPDADLTDSERTLLAAVAT IADDRGSDRLTLPRAALLEASGLGLTALRTALRHLDARGLLVLVEAGRPREKGRPRRSNVYRLNCRPNPESGVGVPPALS SGAPRPGADGAPALVSGAPSIPEETEDMDKIVLTREQIVHALGEAALAVLEAQQAPGEIRHLRAVGDVTNEER
Sequences:
>Translated_233_residues MGRQARTRRNGTEEAPKRTRDRLARAWESGARKVAEAPRWTRDQAHERAREVAQAARDRAADPDADLTDSERTLLAAVAT IADDRGSDRLTLPRAALLEASGLGLTALRTALRHLDARGLLVLVEAGRPREKGRPRRSNVYRLNCRPNPESGVGVPPALS SGAPRPGADGAPALVSGAPSIPEETEDMDKIVLTREQIVHALGEAALAVLEAQQAPGEIRHLRAVGDVTNEER >Mature_232_residues GRQARTRRNGTEEAPKRTRDRLARAWESGARKVAEAPRWTRDQAHERAREVAQAARDRAADPDADLTDSERTLLAAVATI ADDRGSDRLTLPRAALLEASGLGLTALRTALRHLDARGLLVLVEAGRPREKGRPRRSNVYRLNCRPNPESGVGVPPALSS GAPRPGADGAPALVSGAPSIPEETEDMDKIVLTREQIVHALGEAALAVLEAQQAPGEIRHLRAVGDVTNEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25147; Mature: 25015
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQARTRRNGTEEAPKRTRDRLARAWESGARKVAEAPRWTRDQAHERAREVAQAARDRA CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC ADPDADLTDSERTLLAAVATIADDRGSDRLTLPRAALLEASGLGLTALRTALRHLDARGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCCHHHHHHHHHHCCCCCE LVLVEAGRPREKGRPRRSNVYRLNCRPNPESGVGVPPALSSGAPRPGADGAPALVSGAPS EEEEECCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC IPEETEDMDKIVLTREQIVHALGEAALAVLEAQQAPGEIRHLRAVGDVTNEER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure GRQARTRRNGTEEAPKRTRDRLARAWESGARKVAEAPRWTRDQAHERAREVAQAARDRA CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC ADPDADLTDSERTLLAAVATIADDRGSDRLTLPRAALLEASGLGLTALRTALRHLDARGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCCHHHHHHHHHHCCCCCE LVLVEAGRPREKGRPRRSNVYRLNCRPNPESGVGVPPALSSGAPRPGADGAPALVSGAPS EEEEECCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC IPEETEDMDKIVLTREQIVHALGEAALAVLEAQQAPGEIRHLRAVGDVTNEER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA