| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715310
Identifier: 119715310
GI number: 119715310
Start: 1129144
End: 1129536
Strand: Reverse
Name: 119715310
Synonym: Noca_1070
Alternate gene names: NA
Gene position: 1129536-1129144 (Counterclockwise)
Preceding gene: 119715312
Following gene: 119715309
Centisome position: 22.65
GC content: 73.54
Gene sequence:
>393_bases ATGAGCTACCGGATTGCGGAGGCGGCGGAGCTGCTCGGGGTGAGCGACGACACGGTACGCCGCTGGGTGGAGGCCGGCCG GCTCGCGACCCGGCAGCAGGACGGGCGGAGCGTGGTGCCGGGCGCGGACCTGGCCGCCCTGGCGGAGTCGCTGGCCGACC ACCCCGACCGCGAGGCCACCCGCGCCGCGGCGGTCAGCGCCCGCAACCGGCTCGCCGGGATCGTCACGAAGGTCAAGAAG GACACCGTCATGGCGCAGGTCGAGATGATCTGCGGCCCCTACCGGATGGTCTCGCTGATGAGCAGCGAGGCGGCCGACGA GCTCGGCCTCGAGCCCGGCGTCCGGGCGATCGCCTCGGTCAAGTCCACCAACGTCGTCGTGGAGCGCCCGTGA
Upstream 100 bases:
>100_bases ACCGGGGAAACCGACCCGAGCCGACCGGAGGATCCAAAAGAATCGCAGAAGCGGGTTATTGTGGCGATATCAGCCGTATT TGCGGCATAATCGGACCGTG
Downstream 100 bases:
>100_bases CCGGCCGTCAGCACCGCCTCGTCCTGCCCCTGGTCCTCGCCCTCGCGCTGCCGCTCTCCGCCTGCGGCGGGGACGACGAG CAGACCACCCTGACCGTGTA
Product: DNA binding domain-containing protein
Products: NA
Alternate protein names: TOBE Domain Protein; Regulator; Transcriptional Regulator MerR Family Protein; Merr Family Transcriptional Regulator
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSYRIAEAAELLGVSDDTVRRWVEAGRLATRQQDGRSVVPGADLAALAESLADHPDREATRAAAVSARNRLAGIVTKVKK DTVMAQVEMICGPYRMVSLMSSEAADELGLEPGVRAIASVKSTNVVVERP
Sequences:
>Translated_130_residues MSYRIAEAAELLGVSDDTVRRWVEAGRLATRQQDGRSVVPGADLAALAESLADHPDREATRAAAVSARNRLAGIVTKVKK DTVMAQVEMICGPYRMVSLMSSEAADELGLEPGVRAIASVKSTNVVVERP >Mature_129_residues SYRIAEAAELLGVSDDTVRRWVEAGRLATRQQDGRSVVPGADLAALAESLADHPDREATRAAAVSARNRLAGIVTKVKKD TVMAQVEMICGPYRMVSLMSSEAADELGLEPGVRAIASVKSTNVVVERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13877; Mature: 13746
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRIAEAAELLGVSDDTVRRWVEAGRLATRQQDGRSVVPGADLAALAESLADHPDREAT CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHH RAAAVSARNRLAGIVTKVKKDTVMAQVEMICGPYRMVSLMSSEAADELGLEPGVRAIASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSTNVVVERP HCCCEEEECC >Mature Secondary Structure SYRIAEAAELLGVSDDTVRRWVEAGRLATRQQDGRSVVPGADLAALAESLADHPDREAT CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHH RAAAVSARNRLAGIVTKVKKDTVMAQVEMICGPYRMVSLMSSEAADELGLEPGVRAIASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSTNVVVERP HCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA