Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is catD [H]

Identifier: 119715078

GI number: 119715078

Start: 875076

End: 875939

Strand: Direct

Name: catD [H]

Synonym: Noca_0833

Alternate gene names: 119715078

Gene position: 875076-875939 (Clockwise)

Preceding gene: 119715077

Following gene: 119715079

Centisome position: 17.55

GC content: 73.38

Gene sequence:

>864_bases
ATGGCCTCCGCGCCGACCGGGGTCACGGTCACCACGCTCGAGCTGACGGTCGACCGAGACGCGCCGCTGCTGGTGGTCGG
CCCGTCGCTGGGCACCTCGGTCGAGTCGTTGTGGTCCCCCTGTGCCCGGCTCCTGTCCGGCCGGTTCCACGTCGTGGGTT
GGGACCTCCCCGGCCATGGGTCGAACCCCTCGATCCCCGCGACCGGACTGTCGATCGCCGAGCTCGCGGCCGCCGTCGCT
GCGGCGGTCGGTGAGCTCCTGGTCGCGCGAGGACGACCGGAGGGGCCGTTCGGCTATGCCGGTGACTCGGTCGGCGGGGC
CGTGGGACTCCAGCTGCTGCTGGACCACCCCGACCTCGTCTCCAGCGCCGTGCTGGTGTGCACGGGAGCCCGCATCGGCA
CGCCCGCGGGGTGGCGCGAACGCGCCGAGAACGTGCGTCAGGGCGGAACCGCGGCGGTGTTGGCGGGATCCCTCGAGCGA
TGGTTCGCCCCGGGCTTCACCCACCGGCACGACGAGACGACCCGAGCGTTCACCAGGGCGCTGCTGGGCACCCACCCGAG
CGGGTACGCGGCCGTGTGCGCGGCCCTCGAGCGGTTCGATGTCACCGACCGACTCCACGAGATCGCCCAGCCCGTCCTGG
CGGTCGCGGGGGAGCACGACGTGTCGACCCCTCCGGCCTCGCTCGAGACGATCGCCCGCGGCGTCCGGCGCGGCCGACTC
GTGGTCCTGCCCGATGTCGCCCACTTGGCGCCGAGCGAGGACCCCGTCGCGCTGGCCGAGCTGATCAGCGCTCACGTGGC
TGCGACCCCGGTGGCTCGGGTGACGACGCGGAGCGAGCCCTCGAACATTGATCGGACGAACTGA

Upstream 100 bases:

>100_bases
TGGCCGTCAAGCGGGCCGTCGCCGAACGGCGGACCGTGGACCGCGAGCGCGCTGGTGACCTGACTCGCTCCGTCAAGGAC
CTCCTCAGGGAAGGCGCCTG

Downstream 100 bases:

>100_bases
TGAATCCTCCGCAGATTGGTACTTGTGTGTGATGGATAAGTTTCCGTACGGTCAGGTGACGCCCATCACAGCCGATGGGC
GGGACCCGGTCGAAAGTGCT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVA
AAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLER
WFAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL
VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN

Sequences:

>Translated_287_residues
MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVA
AAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLER
WFAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL
VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN
>Mature_286_residues
ASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVAA
AVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERW
FAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRLV
VLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 29698; Mature: 29567

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHG
CCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
SNPSIPATGLSIAELAAAVAAAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH
SSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERWFAPGFTHRHDETTRAFTRA
HHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE
VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN
EEECCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHG
CCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
SNPSIPATGLSIAELAAAVAAAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH
SSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERWFAPGFTHRHDETTRAFTRA
HHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE
VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN
EEECCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]