| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is catD [H]
Identifier: 119715078
GI number: 119715078
Start: 875076
End: 875939
Strand: Direct
Name: catD [H]
Synonym: Noca_0833
Alternate gene names: 119715078
Gene position: 875076-875939 (Clockwise)
Preceding gene: 119715077
Following gene: 119715079
Centisome position: 17.55
GC content: 73.38
Gene sequence:
>864_bases ATGGCCTCCGCGCCGACCGGGGTCACGGTCACCACGCTCGAGCTGACGGTCGACCGAGACGCGCCGCTGCTGGTGGTCGG CCCGTCGCTGGGCACCTCGGTCGAGTCGTTGTGGTCCCCCTGTGCCCGGCTCCTGTCCGGCCGGTTCCACGTCGTGGGTT GGGACCTCCCCGGCCATGGGTCGAACCCCTCGATCCCCGCGACCGGACTGTCGATCGCCGAGCTCGCGGCCGCCGTCGCT GCGGCGGTCGGTGAGCTCCTGGTCGCGCGAGGACGACCGGAGGGGCCGTTCGGCTATGCCGGTGACTCGGTCGGCGGGGC CGTGGGACTCCAGCTGCTGCTGGACCACCCCGACCTCGTCTCCAGCGCCGTGCTGGTGTGCACGGGAGCCCGCATCGGCA CGCCCGCGGGGTGGCGCGAACGCGCCGAGAACGTGCGTCAGGGCGGAACCGCGGCGGTGTTGGCGGGATCCCTCGAGCGA TGGTTCGCCCCGGGCTTCACCCACCGGCACGACGAGACGACCCGAGCGTTCACCAGGGCGCTGCTGGGCACCCACCCGAG CGGGTACGCGGCCGTGTGCGCGGCCCTCGAGCGGTTCGATGTCACCGACCGACTCCACGAGATCGCCCAGCCCGTCCTGG CGGTCGCGGGGGAGCACGACGTGTCGACCCCTCCGGCCTCGCTCGAGACGATCGCCCGCGGCGTCCGGCGCGGCCGACTC GTGGTCCTGCCCGATGTCGCCCACTTGGCGCCGAGCGAGGACCCCGTCGCGCTGGCCGAGCTGATCAGCGCTCACGTGGC TGCGACCCCGGTGGCTCGGGTGACGACGCGGAGCGAGCCCTCGAACATTGATCGGACGAACTGA
Upstream 100 bases:
>100_bases TGGCCGTCAAGCGGGCCGTCGCCGAACGGCGGACCGTGGACCGCGAGCGCGCTGGTGACCTGACTCGCTCCGTCAAGGAC CTCCTCAGGGAAGGCGCCTG
Downstream 100 bases:
>100_bases TGAATCCTCCGCAGATTGGTACTTGTGTGTGATGGATAAGTTTCCGTACGGTCAGGTGACGCCCATCACAGCCGATGGGC GGGACCCGGTCGAAAGTGCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVA AAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLER WFAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN
Sequences:
>Translated_287_residues MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVA AAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLER WFAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN >Mature_286_residues ASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHGSNPSIPATGLSIAELAAAVAA AVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLVSSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERW FAPGFTHRHDETTRAFTRALLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRLV VLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29698; Mature: 29567
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHG CCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC SNPSIPATGLSIAELAAAVAAAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH SSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERWFAPGFTHRHDETTRAFTRA HHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN EEECCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure ASAPTGVTVTTLELTVDRDAPLLVVGPSLGTSVESLWSPCARLLSGRFHVVGWDLPGHG CCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC SNPSIPATGLSIAELAAAVAAAVGELLVARGRPEGPFGYAGDSVGGAVGLQLLLDHPDLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH SSAVLVCTGARIGTPAGWRERAENVRQGGTAAVLAGSLERWFAPGFTHRHDETTRAFTRA HHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLGTHPSGYAAVCAALERFDVTDRLHEIAQPVLAVAGEHDVSTPPASLETIARGVRRGRL HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE VVLPDVAHLAPSEDPVALAELISAHVAATPVARVTTRSEPSNIDRTN EEECCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]