Click here to switch to the map view.

The map label for this gene is mer [H]

Identifier: 119715057

GI number: 119715057

Start: 853787

End: 854713

Strand: Direct

Name: mer [H]

Synonym: Noca_0810

Alternate gene names: 119715057

Gene position: 853787-854713 (Clockwise)

Preceding gene: 119715055

Following gene: 119715060

Centisome position: 17.12

GC content: 69.26

Gene sequence:

>927_bases
ATGACCGGTGATCTTCTGCGGCTCGGCCTCGGGGTCACGGCCGCGCCTGATGTCGTCCAGGCTGCGCGACGCGCGGAAGA
TCTCGGGTTCGGGTATGTCAGTTGCGGGGAGCATCTCTTCTTCCATGGCGCCGTGCCAAACGCATTCGTCGCTCTAGCAG
CGGCGGCGGCCGTGACCGACCGGATCGAACTGCTCAGCTCGATCACGATCCTGCCGCTCTACCCCGCAGCGATGGCGGCG
AAGCTCGCGGCGATGGTGGACGTGGTCTCGGCCGGGCGGTTCAACCTCGGAGTGGGCGCCGGCGGCGAGTTCGCTCGGGA
GTTCGATGCGGTCGGCGTTCCCGTCGCCCAGCGTGGGGCGCGCACCGACGAGGGGCTCGAGGTGCTCCGGCTCCTCTTCA
CGGGCGAGGAGGTGCACTTCCAAGGCACGTGGAGCAGTCTCGACGCACTGGCGCTGAACCCGCCGCCCTGTCGCCGGGGT
GGGCCACCCTTGTGGATCGCCGGCCGGGGCGACGTAGCGACTCGGCGAGCCGCCCGGTGGGGCGATGTATGGATGCCGCA
CCTGTGCACACCGGGACAGCTCGCCCGCGGCATGTCCCTGGTGCGCGAACGCACTGAGGAGTTCGGGCGGCGCCCTGACG
ATGTCACCGGCGCGGTCTTCGCTTTCGTCACCACCTATCCCGACGGGGACGCCGCACGACGGACGGCGATCGACTGGGTG
GGCAACAACTACAAGCAGGACTTCAGCGAGCTCGGCCACCTGCTCGTAGCGGGTACCCCGACGGAGTGTGCGGATCGGCT
GCGCGAGTACCAGGCGGCCGGCGCCGCCTCGGTACAGCTGACTATCGCTGCACCCCAAGAGGATGCTGACGTGATGCTCG
ACCGCATCGCGCACGAGATCCTCCCGCAGTTCGCCCCGTCGCCCTAG

Upstream 100 bases:

>100_bases
TTCCCTTCGGGGGACCTCGGCGACCTGGGCGGAGCGTGCCACGTGACCTTTCCTTCCCGGCAAGCCTGGCAGACTGTCGA
ACGTTCGGAAGGATACTCTC

Downstream 100 bases:

>100_bases
GCCCGGGCCGGTCATGCCCCAGGTCAGCGACCGCGGAACACGGGGGCGCGCTTCTCCAGGAATGCCCTGATGCCCTCGTG
CGCGTCCTCGGAGGCATTGG

Product: luciferase family protein

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTGDLLRLGLGVTAAPDVVQAARRAEDLGFGYVSCGEHLFFHGAVPNAFVALAAAAAVTDRIELLSSITILPLYPAAMAA
KLAAMVDVVSAGRFNLGVGAGGEFAREFDAVGVPVAQRGARTDEGLEVLRLLFTGEEVHFQGTWSSLDALALNPPPCRRG
GPPLWIAGRGDVATRRAARWGDVWMPHLCTPGQLARGMSLVRERTEEFGRRPDDVTGAVFAFVTTYPDGDAARRTAIDWV
GNNYKQDFSELGHLLVAGTPTECADRLREYQAAGAASVQLTIAAPQEDADVMLDRIAHEILPQFAPSP

Sequences:

>Translated_308_residues
MTGDLLRLGLGVTAAPDVVQAARRAEDLGFGYVSCGEHLFFHGAVPNAFVALAAAAAVTDRIELLSSITILPLYPAAMAA
KLAAMVDVVSAGRFNLGVGAGGEFAREFDAVGVPVAQRGARTDEGLEVLRLLFTGEEVHFQGTWSSLDALALNPPPCRRG
GPPLWIAGRGDVATRRAARWGDVWMPHLCTPGQLARGMSLVRERTEEFGRRPDDVTGAVFAFVTTYPDGDAARRTAIDWV
GNNYKQDFSELGHLLVAGTPTECADRLREYQAAGAASVQLTIAAPQEDADVMLDRIAHEILPQFAPSP
>Mature_307_residues
TGDLLRLGLGVTAAPDVVQAARRAEDLGFGYVSCGEHLFFHGAVPNAFVALAAAAAVTDRIELLSSITILPLYPAAMAAK
LAAMVDVVSAGRFNLGVGAGGEFAREFDAVGVPVAQRGARTDEGLEVLRLLFTGEEVHFQGTWSSLDALALNPPPCRRGG
PPLWIAGRGDVATRRAARWGDVWMPHLCTPGQLARGMSLVRERTEEFGRRPDDVTGAVFAFVTTYPDGDAARRTAIDWVG
NNYKQDFSELGHLLVAGTPTECADRLREYQAAGAASVQLTIAAPQEDADVMLDRIAHEILPQFAPSP

Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 32836; Mature: 32704

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDLLRLGLGVTAAPDVVQAARRAEDLGFGYVSCGEHLFFHGAVPNAFVALAAAAAVTD
CCCCCEECCCCCCCCHHHHHHHHHHHHCCCCHHECCCEEEEECCCHHHHHHHHHHHHHHH
RIELLSSITILPLYPAAMAAKLAAMVDVVSAGRFNLGVGAGGEFAREFDAVGVPVAQRGA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHCCC
RTDEGLEVLRLLFTGEEVHFQGTWSSLDALALNPPPCRRGGPPLWIAGRGDVATRRAARW
CCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHC
GDVWMPHLCTPGQLARGMSLVRERTEEFGRRPDDVTGAVFAFVTTYPDGDAARRTAIDWV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEECCCCCHHHHHHHHHH
GNNYKQDFSELGHLLVAGTPTECADRLREYQAAGAASVQLTIAAPQEDADVMLDRIAHEI
CCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH
LPQFAPSP
HHHCCCCC
>Mature Secondary Structure 
TGDLLRLGLGVTAAPDVVQAARRAEDLGFGYVSCGEHLFFHGAVPNAFVALAAAAAVTD
CCCCEECCCCCCCCHHHHHHHHHHHHCCCCHHECCCEEEEECCCHHHHHHHHHHHHHHH
RIELLSSITILPLYPAAMAAKLAAMVDVVSAGRFNLGVGAGGEFAREFDAVGVPVAQRGA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHCCC
RTDEGLEVLRLLFTGEEVHFQGTWSSLDALALNPPPCRRGGPPLWIAGRGDVATRRAARW
CCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHC
GDVWMPHLCTPGQLARGMSLVRERTEEFGRRPDDVTGAVFAFVTTYPDGDAARRTAIDWV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEECCCCCHHHHHHHHHH
GNNYKQDFSELGHLLVAGTPTECADRLREYQAAGAASVQLTIAAPQEDADVMLDRIAHEI
CCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH
LPQFAPSP
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]