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The map label for this gene is 119714975

Identifier: 119714975

GI number: 119714975

Start: 776583

End: 777587

Strand: Direct

Name: 119714975

Synonym: Noca_0728

Alternate gene names: NA

Gene position: 776583-777587 (Clockwise)

Preceding gene: 119714974

Following gene: 119714976

Centisome position: 15.58

GC content: 73.43

Gene sequence:

>1005_bases
ATGGTGCGGCTGCGTAGGACGTCGCCCGGCCAGCCGGGCTGGACCCGGCGCCGGGCGGGGAGGGGGTTCGTCTACCTCGA
CGAGCAGGGCTCCCGCCTGCCCGACGAGGACGCGCAGCGGGTCCGCGACCTCGTCATCCCACCGGCCTGGACCGACGTGT
GGGTCACGCCGTACGACAACGGGCACCTGCAGGCGGTCGGCACCGACGACGCCGGTCGGCGCCAGTACCTCTACCACCCG
GACTGGCGGGCCCGGCGGGACGCCGAGAAGTTCGACCGGATGCTCGAGTTCGGCAAGGCACTGACCAGGGCCCGCGAGCT
CGTCGTGCGCGACCTCGGCCTGGAGGGGATGCCGCTCGAGCGGGCCTGCGCGGCCGCGGTCCGGCTGCTCGACCTGGGCT
ACTTCCGGATCGGCAACGACGTGTACTCCGACGCCCACGGGTCGTTCGGGCTGACGACGCTCGAGCGCCGGCACGTGCGC
CGCCACCAGGACCGGCTGGTGTTCGCGTTCGTCGGCAAGTCCGGGGTCGAGCACCGGATCGAGATCGACGACGCGGTCGT
GATCGAGGCGATCGACGTGATGCGCCGCCGCCGCAGTGCGGACCTGCGGCTGTTGGCCTACAAGAACGGCCGCGGCTGGC
GCTCGGTGCTGCCCGAGCTGGTCAACGACTACGTGCGTTCGTCGACCGGCCTCGAGGCGACGGCGAAGGACTTCCGGACC
TGGCACGCCACCGTGCTCGCCGCGGCGGCGCTCGCCGAGACGCCGGAGCCGGGCCGGTCGGCGGCCTCGCGCAAGCGGGC
GGTCGCCGGGGCGATGAAGGAGGTGGCGTCCTTCCTCGGCAACACCCCGACGCTGGCGCGCTCGTCGTACGTCGACCCGC
GCGTCGTCGACGCCTACGAGGAGGGCCGGACGATCGCGCGGGCCACCGGGCGCGCCTACGACAGCCCCGACGAGCGGCAG
GCGGCGCTGGAACGTGCGACGCTGAGGCTGCTCAAGGAGGTATAG

Upstream 100 bases:

>100_bases
CCCGGGGGCGATGGTGGCGGCGACCCGTGGTGGCCCTGGCTGCTGGGTGGCGCGATCGTCGCCGGGTTTGTCGGCCTGAT
CGCGCGGCTACTGACGCGCC

Downstream 100 bases:

>100_bases
GGCGTGTCTCCCAAGTCCATGGCCTGCTGCGCGTCGCCCATCACGCGCTCTCGCTGCGTTGCCGTCGCTCGACAGACAAG
CCCGGTATGCCTTCGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MVRLRRTSPGQPGWTRRRAGRGFVYLDEQGSRLPDEDAQRVRDLVIPPAWTDVWVTPYDNGHLQAVGTDDAGRRQYLYHP
DWRARRDAEKFDRMLEFGKALTRARELVVRDLGLEGMPLERACAAAVRLLDLGYFRIGNDVYSDAHGSFGLTTLERRHVR
RHQDRLVFAFVGKSGVEHRIEIDDAVVIEAIDVMRRRRSADLRLLAYKNGRGWRSVLPELVNDYVRSSTGLEATAKDFRT
WHATVLAAAALAETPEPGRSAASRKRAVAGAMKEVASFLGNTPTLARSSYVDPRVVDAYEEGRTIARATGRAYDSPDERQ
AALERATLRLLKEV

Sequences:

>Translated_334_residues
MVRLRRTSPGQPGWTRRRAGRGFVYLDEQGSRLPDEDAQRVRDLVIPPAWTDVWVTPYDNGHLQAVGTDDAGRRQYLYHP
DWRARRDAEKFDRMLEFGKALTRARELVVRDLGLEGMPLERACAAAVRLLDLGYFRIGNDVYSDAHGSFGLTTLERRHVR
RHQDRLVFAFVGKSGVEHRIEIDDAVVIEAIDVMRRRRSADLRLLAYKNGRGWRSVLPELVNDYVRSSTGLEATAKDFRT
WHATVLAAAALAETPEPGRSAASRKRAVAGAMKEVASFLGNTPTLARSSYVDPRVVDAYEEGRTIARATGRAYDSPDERQ
AALERATLRLLKEV
>Mature_334_residues
MVRLRRTSPGQPGWTRRRAGRGFVYLDEQGSRLPDEDAQRVRDLVIPPAWTDVWVTPYDNGHLQAVGTDDAGRRQYLYHP
DWRARRDAEKFDRMLEFGKALTRARELVVRDLGLEGMPLERACAAAVRLLDLGYFRIGNDVYSDAHGSFGLTTLERRHVR
RHQDRLVFAFVGKSGVEHRIEIDDAVVIEAIDVMRRRRSADLRLLAYKNGRGWRSVLPELVNDYVRSSTGLEATAKDFRT
WHATVLAAAALAETPEPGRSAASRKRAVAGAMKEVASFLGNTPTLARSSYVDPRVVDAYEEGRTIARATGRAYDSPDERQ
AALERATLRLLKEV

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37683; Mature: 37683

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLRRTSPGQPGWTRRRAGRGFVYLDEQGSRLPDEDAQRVRDLVIPPAWTDVWVTPYDN
CEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCC
GHLQAVGTDDAGRRQYLYHPDWRARRDAEKFDRMLEFGKALTRARELVVRDLGLEGMPLE
CEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RACAAAVRLLDLGYFRIGNDVYSDAHGSFGLTTLERRHVRRHQDRLVFAFVGKSGVEHRI
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEE
EIDDAVVIEAIDVMRRRRSADLRLLAYKNGRGWRSVLPELVNDYVRSSTGLEATAKDFRT
ECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
WHATVLAAAALAETPEPGRSAASRKRAVAGAMKEVASFLGNTPTLARSSYVDPRVVDAYE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH
EGRTIARATGRAYDSPDERQAALERATLRLLKEV
HCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVRLRRTSPGQPGWTRRRAGRGFVYLDEQGSRLPDEDAQRVRDLVIPPAWTDVWVTPYDN
CEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCC
GHLQAVGTDDAGRRQYLYHPDWRARRDAEKFDRMLEFGKALTRARELVVRDLGLEGMPLE
CEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
RACAAAVRLLDLGYFRIGNDVYSDAHGSFGLTTLERRHVRRHQDRLVFAFVGKSGVEHRI
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEE
EIDDAVVIEAIDVMRRRRSADLRLLAYKNGRGWRSVLPELVNDYVRSSTGLEATAKDFRT
ECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
WHATVLAAAALAETPEPGRSAASRKRAVAGAMKEVASFLGNTPTLARSSYVDPRVVDAYE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH
EGRTIARATGRAYDSPDERQAALERATLRLLKEV
HCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA