| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yfaO [C]
Identifier: 119714962
GI number: 119714962
Start: 759292
End: 760191
Strand: Direct
Name: yfaO [C]
Synonym: Noca_0715
Alternate gene names: 119714962
Gene position: 759292-760191 (Clockwise)
Preceding gene: 119714961
Following gene: 119714971
Centisome position: 15.23
GC content: 74.78
Gene sequence:
>900_bases ATGGTCGGGCTTCCGAAGCGGCAGCGGGTGGCGGCGTACGCCGTGATCATCCGCGAGGGCCGGATCCTGCTGAGCCGGCT GTCGCCGAGCATCGCCTCCGAGGAGCTGTGGACCCTGCCCGGCGGTGGCCTCGACCACGGAGAGGACCCCCGCGACGCGG TCATCCGGGAGGTCTACGAGGAGACCGGCCTGCACGCGGTCGTCGGTGAGACCGCACGGGTGTACTCCGCGCACCTGCCC GGCGTGTGGCGCGACGGCCGGCGGGTGGACGCCCATGCGCTGCGGATCGTCTACGACGGGTGGGTGCCGGTCGACGCCCC CGAGCCGCGGGTCGTCGAGGTCGACGGCTCGACCGTGGAGGCGGCCTGGAAGCCGCTCGGGGACGTGCTCGACGAGACCG TCCCGGTGGTGCCGATGGTGCTCGAGGCGGTGGCCGACCACCGCCCCTTCCGCCATCAGCGGCTCGGCGCATACGCGCTG ATCCGGCGCGCCGATGCCGTGCTGCTCGTCCGGATCTCCGGGCTCGGCTTCCACACCGGCTCGTGGACGCTGCCCGGCGG CGGCGTCGACCACGGGGAGGCGCCCCGCTCCGCTGTCATCCGCGAGGTCCGCGAGGAGGCCGGCGTCGAGTGCCAGGTCG GGGAGCTGGTCGCCGTCCACGACGACCACTTCAGCGGCACGGCGCCGTCGGGCCGCTACGAGGACTTCCACTCGGTGGCG CTGGTCTTCGCGGCCGACCTCGAGGCCGCCGCCGAGCCGCGCCTGGCGGAGCAGGGCGGCACCTCGGCGGAGGTCGCCTG GGTGCCTCTCGCCGAGATCGAGTCGGGGCAGCGGCCGGTGCTCCCGCTGGTCCGCGAGGCCCTCAGCGCAGCGGAGTGGC CGCGACCTCGCACAGGTTGA
Upstream 100 bases:
>100_bases GTGACCGACGAGGACCGCGACCGGGCCGCGCGCGTGTGGCGGTGGGCGGGGCGCCGCTCGATCGCGCTGGACCATCGCCC GCCGTTCGGCTGAGACGCTG
Downstream 100 bases:
>100_bases GGTAGGGCCTGGCGACATTGTTGGTGACCATGTAGGACGAGAGCACCCACGTCCTCTTCACCCCGCCGACGGACCACCAG ATGCGCATCATCCCGTTGCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT-Like Domain-Containing Protein; MutT/NUDIX Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; MutT/NUDIX Family Phosphohydrolase
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG
Sequences:
>Translated_299_residues MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG >Mature_299_residues MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 32348; Mature: 32348
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYE CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH ETGLHAVVGETARVYSAHLPGVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVE HCCCEEECCCHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEECCCCCCEEEEECCCCHH AAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYALIRRADAVLLVRISGLGFHTG HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEECC SWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA CEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHH LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG HHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYE CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH ETGLHAVVGETARVYSAHLPGVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVE HCCCEEECCCHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEECCCCCCEEEEECCCCHH AAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYALIRRADAVLLVRISGLGFHTG HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEECC SWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA CEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHH LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG HHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA