Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yfaO [C]

Identifier: 119714962

GI number: 119714962

Start: 759292

End: 760191

Strand: Direct

Name: yfaO [C]

Synonym: Noca_0715

Alternate gene names: 119714962

Gene position: 759292-760191 (Clockwise)

Preceding gene: 119714961

Following gene: 119714971

Centisome position: 15.23

GC content: 74.78

Gene sequence:

>900_bases
ATGGTCGGGCTTCCGAAGCGGCAGCGGGTGGCGGCGTACGCCGTGATCATCCGCGAGGGCCGGATCCTGCTGAGCCGGCT
GTCGCCGAGCATCGCCTCCGAGGAGCTGTGGACCCTGCCCGGCGGTGGCCTCGACCACGGAGAGGACCCCCGCGACGCGG
TCATCCGGGAGGTCTACGAGGAGACCGGCCTGCACGCGGTCGTCGGTGAGACCGCACGGGTGTACTCCGCGCACCTGCCC
GGCGTGTGGCGCGACGGCCGGCGGGTGGACGCCCATGCGCTGCGGATCGTCTACGACGGGTGGGTGCCGGTCGACGCCCC
CGAGCCGCGGGTCGTCGAGGTCGACGGCTCGACCGTGGAGGCGGCCTGGAAGCCGCTCGGGGACGTGCTCGACGAGACCG
TCCCGGTGGTGCCGATGGTGCTCGAGGCGGTGGCCGACCACCGCCCCTTCCGCCATCAGCGGCTCGGCGCATACGCGCTG
ATCCGGCGCGCCGATGCCGTGCTGCTCGTCCGGATCTCCGGGCTCGGCTTCCACACCGGCTCGTGGACGCTGCCCGGCGG
CGGCGTCGACCACGGGGAGGCGCCCCGCTCCGCTGTCATCCGCGAGGTCCGCGAGGAGGCCGGCGTCGAGTGCCAGGTCG
GGGAGCTGGTCGCCGTCCACGACGACCACTTCAGCGGCACGGCGCCGTCGGGCCGCTACGAGGACTTCCACTCGGTGGCG
CTGGTCTTCGCGGCCGACCTCGAGGCCGCCGCCGAGCCGCGCCTGGCGGAGCAGGGCGGCACCTCGGCGGAGGTCGCCTG
GGTGCCTCTCGCCGAGATCGAGTCGGGGCAGCGGCCGGTGCTCCCGCTGGTCCGCGAGGCCCTCAGCGCAGCGGAGTGGC
CGCGACCTCGCACAGGTTGA

Upstream 100 bases:

>100_bases
GTGACCGACGAGGACCGCGACCGGGCCGCGCGCGTGTGGCGGTGGGCGGGGCGCCGCTCGATCGCGCTGGACCATCGCCC
GCCGTTCGGCTGAGACGCTG

Downstream 100 bases:

>100_bases
GGTAGGGCCTGGCGACATTGTTGGTGACCATGTAGGACGAGAGCACCCACGTCCTCTTCACCCCGCCGACGGACCACCAG
ATGCGCATCATCCCGTTGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT-Like Domain-Containing Protein; MutT/NUDIX Family Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; MutT/NUDIX Family Phosphohydrolase

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP
GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL
IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA
LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG

Sequences:

>Translated_299_residues
MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP
GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL
IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA
LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG
>Mature_299_residues
MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYEETGLHAVVGETARVYSAHLP
GVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVEAAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYAL
IRRADAVLLVRISGLGFHTGSWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA
LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 32348; Mature: 32348

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYE
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
ETGLHAVVGETARVYSAHLPGVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVE
HCCCEEECCCHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEECCCCCCEEEEECCCCHH
AAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYALIRRADAVLLVRISGLGFHTG
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEECC
SWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA
CEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHH
LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG
HHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVGLPKRQRVAAYAVIIREGRILLSRLSPSIASEELWTLPGGGLDHGEDPRDAVIREVYE
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
ETGLHAVVGETARVYSAHLPGVWRDGRRVDAHALRIVYDGWVPVDAPEPRVVEVDGSTVE
HCCCEEECCCHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEECCCCCCEEEEECCCCHH
AAWKPLGDVLDETVPVVPMVLEAVADHRPFRHQRLGAYALIRRADAVLLVRISGLGFHTG
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEECC
SWTLPGGGVDHGEAPRSAVIREVREEAGVECQVGELVAVHDDHFSGTAPSGRYEDFHSVA
CEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHH
LVFAADLEAAAEPRLAEQGGTSAEVAWVPLAEIESGQRPVLPLVREALSAAEWPRPRTG
HHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA