| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yhhW [C]
Identifier: 119714911
GI number: 119714911
Start: 703882
End: 704937
Strand: Direct
Name: yhhW [C]
Synonym: Noca_0663
Alternate gene names: 119714911
Gene position: 703882-704937 (Clockwise)
Preceding gene: 119714910
Following gene: 119714912
Centisome position: 14.12
GC content: 74.62
Gene sequence:
>1056_bases ATGAGCAACCTCGAGGACCGGCCCGACGAGGTCGACGGCGCGTGTGCGGTGACCTCGGGCATCGAGATCATGACGCCGCG CGACGTGCCGCTCGGCGGGCCCCGCGCGATGCGGGTGCGGCGTACCCTCCCGCAGCGCCAGCGCTCGCTGATCGGCGCCT GGTGCTTCGTCGACCACTACGGACCCGACCGGGTCGCCGACACCGGCGGCATGTCGGTCGCGCCGCACCCGCACACCGGG CTGCAGACGGTGAGCTGGCTGTTCACCGGCGAGGTCGAGCACCGCGACAGCGCGGGCAACCACGCGATGGTCCGGCCCGG AGAGGTCAACCTGATGACCGCCGGCCGCGGGATCAGCCACTCGGAGGTCTCGCCGGCCGCGACGGAGACGTTGCACGGCG CCCAGCTGTGGGTGGCCCTGCCCGACGCGGACCGCTTCACCGACCCCGGGTTCGCCCACCACGCGCCCCCCGCGGTGACC GGGGACGGCTGGACCGCGCGGGTGTTCCTCGGGTCGCTGCTCGGCGACAGCTCGCCGGTCCCGACGTACACCCCGCTGCT GGGCGCCGAGCTGCTGCTCGGGCCGGGCACGACCCTGACGCTCGACGTGGACGAGACCTTCGAGCACGGCGTCCTCGCGG ACACCGGCGTGCTCTCCGTCGCGGGCGTCGAGACCAAGCAGAACGACCTCGCCTACGTCCCGCCGGGCCGTTCGACGTTG ACCCTGACGGCGTACGACGAGCCGGTCCGGCTGCTGCTCCTCGGCGGGCCGCCGTTCCCCGAGAGCATCGTGATGTGGTG GAACTTCGTGGGCCGCAGCCACGACGAGATCGTGGCGTTCCGCGAGGAGTGGCAGGCCCAGGTCCTCGACCCGGACGGCG CCGAGCGGGCGCCGGCCGAGGCGGGTGGCCGGCGCGAGGACGGCGGCGCGTACGCCCGCGTGGTCCGAGACTCCCAGCTG GTCCGGGAGGGCCGGTTCGGCGTCGTCGTCGGTGACCACCTGCCGCCGATCCCCGCGCCGCCGCTGCCCAACGTCCGGCT CCGCCCGCGCACCTGA
Upstream 100 bases:
>100_bases ACGAGGGCAAGCGGCACGTGGAGCCGGAGCACCTGAGCTGAGACGCTTTCTATGGGGTTGACACCCCCTAGAAGCGTCTC AGGCGCGGCACAATGGGGCG
Downstream 100 bases:
>100_bases CCGCAGCTGTCGTCGACCCGCCGCCCCGGCGATAGATCCGTCGGGTGCCGGGCGGCGGACCGCGCACACGCCGGTGTCGG CACGGTCCGCCAGGATGTCC
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1205 [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSNLEDRPDEVDGACAVTSGIEIMTPRDVPLGGPRAMRVRRTLPQRQRSLIGAWCFVDHYGPDRVADTGGMSVAPHPHTG LQTVSWLFTGEVEHRDSAGNHAMVRPGEVNLMTAGRGISHSEVSPAATETLHGAQLWVALPDADRFTDPGFAHHAPPAVT GDGWTARVFLGSLLGDSSPVPTYTPLLGAELLLGPGTTLTLDVDETFEHGVLADTGVLSVAGVETKQNDLAYVPPGRSTL TLTAYDEPVRLLLLGGPPFPESIVMWWNFVGRSHDEIVAFREEWQAQVLDPDGAERAPAEAGGRREDGGAYARVVRDSQL VREGRFGVVVGDHLPPIPAPPLPNVRLRPRT
Sequences:
>Translated_351_residues MSNLEDRPDEVDGACAVTSGIEIMTPRDVPLGGPRAMRVRRTLPQRQRSLIGAWCFVDHYGPDRVADTGGMSVAPHPHTG LQTVSWLFTGEVEHRDSAGNHAMVRPGEVNLMTAGRGISHSEVSPAATETLHGAQLWVALPDADRFTDPGFAHHAPPAVT GDGWTARVFLGSLLGDSSPVPTYTPLLGAELLLGPGTTLTLDVDETFEHGVLADTGVLSVAGVETKQNDLAYVPPGRSTL TLTAYDEPVRLLLLGGPPFPESIVMWWNFVGRSHDEIVAFREEWQAQVLDPDGAERAPAEAGGRREDGGAYARVVRDSQL VREGRFGVVVGDHLPPIPAPPLPNVRLRPRT >Mature_350_residues SNLEDRPDEVDGACAVTSGIEIMTPRDVPLGGPRAMRVRRTLPQRQRSLIGAWCFVDHYGPDRVADTGGMSVAPHPHTGL QTVSWLFTGEVEHRDSAGNHAMVRPGEVNLMTAGRGISHSEVSPAATETLHGAQLWVALPDADRFTDPGFAHHAPPAVTG DGWTARVFLGSLLGDSSPVPTYTPLLGAELLLGPGTTLTLDVDETFEHGVLADTGVLSVAGVETKQNDLAYVPPGRSTLT LTAYDEPVRLLLLGGPPFPESIVMWWNFVGRSHDEIVAFREEWQAQVLDPDGAERAPAEAGGRREDGGAYARVVRDSQLV REGRFGVVVGDHLPPIPAPPLPNVRLRPRT
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=248, Percent_Identity=28.6290322580645, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4505823, Length=248, Percent_Identity=28.6290322580645, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1789847, Length=119, Percent_Identity=34.453781512605, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 37730; Mature: 37599
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLEDRPDEVDGACAVTSGIEIMTPRDVPLGGPRAMRVRRTLPQRQRSLIGAWCFVDHY CCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECC GPDRVADTGGMSVAPHPHTGLQTVSWLFTGEVEHRDSAGNHAMVRPGEVNLMTAGRGISH CCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCC SEVSPAATETLHGAQLWVALPDADRFTDPGFAHHAPPAVTGDGWTARVFLGSLLGDSSPV CCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCC PTYTPLLGAELLLGPGTTLTLDVDETFEHGVLADTGVLSVAGVETKQNDLAYVPPGRSTL CCCCHHHCCEEEECCCCEEEEECCCCCCCCCEECCCEEEEECCCCCCCCEEEECCCCCEE TLTAYDEPVRLLLLGGPPFPESIVMWWNFVGRSHDEIVAFREEWQAQVLDPDGAERAPAE EEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHEEEEHHHCCEEEECCCCCCCCCHH AGGRREDGGAYARVVRDSQLVREGRFGVVVGDHLPPIPAPPLPNVRLRPRT CCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure SNLEDRPDEVDGACAVTSGIEIMTPRDVPLGGPRAMRVRRTLPQRQRSLIGAWCFVDHY CCCCCCCCCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECC GPDRVADTGGMSVAPHPHTGLQTVSWLFTGEVEHRDSAGNHAMVRPGEVNLMTAGRGISH CCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCC SEVSPAATETLHGAQLWVALPDADRFTDPGFAHHAPPAVTGDGWTARVFLGSLLGDSSPV CCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCC PTYTPLLGAELLLGPGTTLTLDVDETFEHGVLADTGVLSVAGVETKQNDLAYVPPGRSTL CCCCHHHCCEEEECCCCEEEEECCCCCCCCCEECCCEEEEECCCCCCCCEEEECCCCCEE TLTAYDEPVRLLLLGGPPFPESIVMWWNFVGRSHDEIVAFREEWQAQVLDPDGAERAPAE EEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHEEEEHHHCCEEEECCCCCCCCCHH AGGRREDGGAYARVVRDSQLVREGRFGVVVGDHLPPIPAPPLPNVRLRPRT CCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]