| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714816
Identifier: 119714816
GI number: 119714816
Start: 585699
End: 586034
Strand: Reverse
Name: 119714816
Synonym: Noca_0552
Alternate gene names: NA
Gene position: 586034-585699 (Counterclockwise)
Preceding gene: 119714817
Following gene: 119714815
Centisome position: 11.75
GC content: 74.11
Gene sequence:
>336_bases ATGAGCTTCGAGGAGGACCGGGCCCGCGACCGGGTGCGGGAGGCGGCGAACGCCGGCTACCTGAGCAACTGGGCCGCTGC GCGCGAGCGCTTCGAGCAGGCAACGCGCGAGTGGGAAGCGGCCGCCCGGGAGTACCGCGACGCGTACCACCGGATCGCCG ACCGCAACCCCCTGCTCGACGAGTTCGGGCTGACCACCGGCGAGGTCGCGCCGTTGGGCGCCCGCGACCAGGCAGTGCTC GACGCCGCCGAGCACCTGGAGGCGCAGGCCTGGGCTCGACGACAGGCCGCAGCGACCGCGTTCGAGCGCGCCGACGACTT CAGCCACCCGTGGTGA
Upstream 100 bases:
>100_bases GCGTGACCTCGGGCGAGCTGCCGGTGATCCGGTTGGGTGCCCGTGTGGCCCGGATCCCGGCATCCGCTGTGGACGCACTC GCCGAGCAGGGGAAGGTGTC
Downstream 100 bases:
>100_bases TGTGACATGGCCGTGACCGAGGACATGACCCGCGTACGCCAGATCTTCGATGAGGCGATGGCCGAGACGTTCGACGCGCT GTTCAAGGCGCCCGACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSFEEDRARDRVREAANAGYLSNWAAARERFEQATREWEAAAREYRDAYHRIADRNPLLDEFGLTTGEVAPLGARDQAVL DAAEHLEAQAWARRQAAATAFERADDFSHPW
Sequences:
>Translated_111_residues MSFEEDRARDRVREAANAGYLSNWAAARERFEQATREWEAAAREYRDAYHRIADRNPLLDEFGLTTGEVAPLGARDQAVL DAAEHLEAQAWARRQAAATAFERADDFSHPW >Mature_110_residues SFEEDRARDRVREAANAGYLSNWAAARERFEQATREWEAAAREYRDAYHRIADRNPLLDEFGLTTGEVAPLGARDQAVLD AAEHLEAQAWARRQAAATAFERADDFSHPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12679; Mature: 12548
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEEDRARDRVREAANAGYLSNWAAARERFEQATREWEAAAREYRDAYHRIADRNPLLD CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EFGLTTGEVAPLGARDQAVLDAAEHLEAQAWARRQAAATAFERADDFSHPW HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SFEEDRARDRVREAANAGYLSNWAAARERFEQATREWEAAAREYRDAYHRIADRNPLLD CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EFGLTTGEVAPLGARDQAVLDAAEHLEAQAWARRQAAATAFERADDFSHPW HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA