| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714815
Identifier: 119714815
GI number: 119714815
Start: 585456
End: 585692
Strand: Reverse
Name: 119714815
Synonym: Noca_0551
Alternate gene names: NA
Gene position: 585692-585456 (Counterclockwise)
Preceding gene: 119714816
Following gene: 119714814
Centisome position: 11.75
GC content: 69.2
Gene sequence:
>237_bases ATGGCCGTGACCGAGGACATGACCCGCGTACGCCAGATCTTCGATGAGGCGATGGCCGAGACGTTCGACGCGCTGTTCAA GGCGCCCGACGCCGTGGCTGTCGTCGCCGCGGTGGCTCAGGGGGACCTGGCGATCGTGATCACCGGGAGCACCCTGCACG TGGTCTCGGTGACACCGCTCAGCCCGGCGCCGGCGGCGGCGGCGGACGACGACTACAGGCCCGGGATGTATCTGTGA
Upstream 100 bases:
>100_bases CGCCGCCGAGCACCTGGAGGCGCAGGCCTGGGCTCGACGACAGGCCGCAGCGACCGCGTTCGAGCGCGCCGACGACTTCA GCCACCCGTGGTGATGTGAC
Downstream 100 bases:
>100_bases TGTCCCGCACCGCCACCGACCTGACCCGAGGGGGGCAGTAGTCATCGCAGGGCCCATCAGGATTTCGATACTCAGCAACG GGCGTATGGCTCGTGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAVTEDMTRVRQIFDEAMAETFDALFKAPDAVAVVAAVAQGDLAIVITGSTLHVVSVTPLSPAPAAAADDDYRPGMYL
Sequences:
>Translated_78_residues MAVTEDMTRVRQIFDEAMAETFDALFKAPDAVAVVAAVAQGDLAIVITGSTLHVVSVTPLSPAPAAAADDDYRPGMYL >Mature_77_residues AVTEDMTRVRQIFDEAMAETFDALFKAPDAVAVVAAVAQGDLAIVITGSTLHVVSVTPLSPAPAAAADDDYRPGMYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8167; Mature: 8036
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTEDMTRVRQIFDEAMAETFDALFKAPDAVAVVAAVAQGDLAIVITGSTLHVVSVTPL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEECCC SPAPAAAADDDYRPGMYL CCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVTEDMTRVRQIFDEAMAETFDALFKAPDAVAVVAAVAQGDLAIVITGSTLHVVSVTPL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEECCC SPAPAAAADDDYRPGMYL CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA