Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714782

Identifier: 119714782

GI number: 119714782

Start: 549035

End: 549964

Strand: Reverse

Name: 119714782

Synonym: Noca_0518

Alternate gene names: NA

Gene position: 549964-549035 (Counterclockwise)

Preceding gene: 119714799

Following gene: 119714780

Centisome position: 11.03

GC content: 73.87

Gene sequence:

>930_bases
ATGTTGCTCGCGCGTCGCCTGCTGCTCCTCGTCGCGGTGGCCGCGCTGCTGTGCGCCGCAGCCTTCGTGGCCGGGGACGC
GCTGGACGGCGGCTCCTCGGCGCGACCCGCCGCCTCCGGGGCCGGCGCCGCGTCCACCGACCAGCCGGCGACCACCGATC
CGACCGCGGCGCCGAGCTCCTCCGACCCCACCGCGACACCCGGCAGCAGCCCCACCGACGCTCCCGCCCCCACGGCCGCC
GACGAACCGACCCGGCAGCCCACCCACCTGCCCACCCGCCAGCCCACGCTCGTACCGGGCCCGCGCCTGCTGGGCCCGGG
CGACCAGGGCGACGAGGTCCGCGACCTGCAGGCCCGCCTCAAGCAGATCTACTGGTTCAACACCGACGTCACCGGCGTCT
ACGGCGACGTCACCGCCACCGCCGTACGCGGCTTCCAGGCCAAGCGGGAGATCCCGGTCACCGGCGAGGTCGACCAGCGC
ACCCTGGACCGGCTCCGCGCGATGACGAGCACCCCGACCGGCGCCGAGCTGCACAACCGCGGCAACACGCCGGGCGCCCT
CGATGCGCGCTGCCGGACCGGTCGGGTGCTCTGCATCGACAAGACCAGCTCGACCCTGCGCTGGGTGGTCGACGGGACGG
TGCGACAGACCCTGGACGTCCGGTTCGGCGCGTCGACGACCCCGACGCGGGAGGGTGTCTTCCACGTGTACCTGAAGGAC
GCCGACCACGTCTCGCGGCTCTACGGCTCGGCGATGCCGTACTCGATGTTCTTCTCCGGCGGCCAGGCGGTGCACTACTC
GTCGGACTTCGCCGCCGTCGGGTACGCCGGCGCCTCGCACGGCTGCGTCAACGTGCGCGACTACGACGCGCTCGGCCTGC
TCTACGGGCAGGTCCGCGTGGGCGACACGGTCGTCGTGTACTGGTCCTGA

Upstream 100 bases:

>100_bases
CTTGGTCACGACCGCGGGAACTCGCCGCGCGGGTGCAACCGAGCGCCCGCTCCGGGCGTCACCCTCGTGTCGGACTCGTC
TACTTCCCCAGGAGAGCTCC

Downstream 100 bases:

>100_bases
CCGGGACCCTCGGCAGGGTCCTCAGGAGCCCTGGAGGTCGTCGAGCAGACCGTCCGCGGTGGCGACGAGATCCTCGGCGT
CGACGTCCGGCGCCCCGATC

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: Secreted Protein; ErfK/YbiS/YcfS/YnhG Family Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLLARRLLLLVAVAALLCAAAFVAGDALDGGSSARPAASGAGAASTDQPATTDPTAAPSSSDPTATPGSSPTDAPAPTAA
DEPTRQPTHLPTRQPTLVPGPRLLGPGDQGDEVRDLQARLKQIYWFNTDVTGVYGDVTATAVRGFQAKREIPVTGEVDQR
TLDRLRAMTSTPTGAELHNRGNTPGALDARCRTGRVLCIDKTSSTLRWVVDGTVRQTLDVRFGASTTPTREGVFHVYLKD
ADHVSRLYGSAMPYSMFFSGGQAVHYSSDFAAVGYAGASHGCVNVRDYDALGLLYGQVRVGDTVVVYWS

Sequences:

>Translated_309_residues
MLLARRLLLLVAVAALLCAAAFVAGDALDGGSSARPAASGAGAASTDQPATTDPTAAPSSSDPTATPGSSPTDAPAPTAA
DEPTRQPTHLPTRQPTLVPGPRLLGPGDQGDEVRDLQARLKQIYWFNTDVTGVYGDVTATAVRGFQAKREIPVTGEVDQR
TLDRLRAMTSTPTGAELHNRGNTPGALDARCRTGRVLCIDKTSSTLRWVVDGTVRQTLDVRFGASTTPTREGVFHVYLKD
ADHVSRLYGSAMPYSMFFSGGQAVHYSSDFAAVGYAGASHGCVNVRDYDALGLLYGQVRVGDTVVVYWS
>Mature_309_residues
MLLARRLLLLVAVAALLCAAAFVAGDALDGGSSARPAASGAGAASTDQPATTDPTAAPSSSDPTATPGSSPTDAPAPTAA
DEPTRQPTHLPTRQPTLVPGPRLLGPGDQGDEVRDLQARLKQIYWFNTDVTGVYGDVTATAVRGFQAKREIPVTGEVDQR
TLDRLRAMTSTPTGAELHNRGNTPGALDARCRTGRVLCIDKTSSTLRWVVDGTVRQTLDVRFGASTTPTREGVFHVYLKD
ADHVSRLYGSAMPYSMFFSGGQAVHYSSDFAAVGYAGASHGCVNVRDYDALGLLYGQVRVGDTVVVYWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32538; Mature: 32538

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLARRLLLLVAVAALLCAAAFVAGDALDGGSSARPAASGAGAASTDQPATTDPTAAPSS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDPTATPGSSPTDAPAPTAADEPTRQPTHLPTRQPTLVPGPRLLGPGDQGDEVRDLQARL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHH
KQIYWFNTDVTGVYGDVTATAVRGFQAKREIPVTGEVDQRTLDRLRAMTSTPTGAELHNR
HHHEEECCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCC
GNTPGALDARCRTGRVLCIDKTSSTLRWVVDGTVRQTLDVRFGASTTPTREGVFHVYLKD
CCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHEEEEEECCCCCCCCCCEEEEEECC
ADHVSRLYGSAMPYSMFFSGGQAVHYSSDFAAVGYAGASHGCVNVRDYDALGLLYGQVRV
CHHHHHHHCCCCCHHHEECCCCEEEECCCCCEEECCCCCCCEEECCCCCHHEEEEEEEEE
GDTVVVYWS
CCEEEEEEC
>Mature Secondary Structure
MLLARRLLLLVAVAALLCAAAFVAGDALDGGSSARPAASGAGAASTDQPATTDPTAAPSS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SDPTATPGSSPTDAPAPTAADEPTRQPTHLPTRQPTLVPGPRLLGPGDQGDEVRDLQARL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHH
KQIYWFNTDVTGVYGDVTATAVRGFQAKREIPVTGEVDQRTLDRLRAMTSTPTGAELHNR
HHHEEECCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCC
GNTPGALDARCRTGRVLCIDKTSSTLRWVVDGTVRQTLDVRFGASTTPTREGVFHVYLKD
CCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHEEEEEECCCCCCCCCCEEEEEECC
ADHVSRLYGSAMPYSMFFSGGQAVHYSSDFAAVGYAGASHGCVNVRDYDALGLLYGQVRV
CHHHHHHHCCCCCHHHEECCCCEEEECCCCCEEECCCCCCCEEECCCCCHHEEEEEEEEE
GDTVVVYWS
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA