| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714765
Identifier: 119714765
GI number: 119714765
Start: 532363
End: 532965
Strand: Direct
Name: 119714765
Synonym: Noca_0501
Alternate gene names: NA
Gene position: 532363-532965 (Clockwise)
Preceding gene: 119714764
Following gene: 119714766
Centisome position: 10.68
GC content: 72.14
Gene sequence:
>603_bases ATGACCCGTCTCCGGCGCAGCTTGGGAGCGGGGGCCGTCGGCCTGTTGCTCCTCACCGGGTGCTCCTCGCTGGAGGGCAC CGGCGACAAGGGCTACATCAGCGGCGATCAGCGGGTGCGCGTCGTCGACCCGGCCGACCGCGGGTCGGCCGTCGAGCTCA CGGGCACCTCCCTGACCGGCGACCCGGTGGACGTCGCCGACTCCCGGGGTCGGGTCCTGGTGGTCAACACCTGGTGGTCG GGCTGCGCCCCGTGCCGCAGCGAGATGCCGATGCTGACCGCCGCCGCGAAGGAACTGGGCGAGCGGGCCGACTTCCTCGG CATCAACATCCGCGACGCCAGCGCCAGCCAGGGGCAGGCGTTCATACGCAGCGTGGGCGCGGAGTACCCGTCGATCTACG ACCCGACCGGCAAGGCGGTCCTCGCGTTCGCAGGGAAGACCACCCTGTCGGCGATCCCGACCACGATCGTGCTCGACGCC GAAGGCCGGGTCGCCGCCGTCATCACCGGGGAGATCCCCTCGAAGCAGACCCTGGTCGACGTCGTCGACGAGGTCGCTGC CAACGCCGCCGCGGAGTCGGGCGGGGAGACCGCGGATGGGTGA
Upstream 100 bases:
>100_bases CGCAGGTGAGCTACTCCGAGCCCGCCGGCGACCTGATCCCCGTGCAGGACAAGTCGGCGCCGTTCTCCGCCGGCGGCGCG CCCGAGCAGCGCAGGCCCTG
Downstream 100 bases:
>100_bases CTGGTTCCAGCAGACCGCGTTCTCCGGGTCGCTCGTCCTCGCCGTGCCGGTGGCCCTGATCGCCGGCCTGGTGTCCTTCT TCTCCCCGTGCGTGATCCCG
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Secreted Protein; Redoxin Domain Protein; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin Family ThiolDisulfide Interchange Protein; Thiol-Disulfide Isomerase-Like Thioredoxin; Thioredoxin; Redoxin; ThiolDisulfide Interchange Protein; Thiol-Disulfide Oxidoreductase; ThiolDisulfide Interchange Protein DsbE; Thioredoxin Protein; Tat Domain-Containing Protein; Cytochrome C Biogenesis Protein; Lipoprotein; Electron Transport Related Protein; Thiol-Disulfide Isomerase And Thioredoxins-Like Protein; Thioredoxin Family Protein; Cytochrome C Biogenesis Protein ResA; ThiolDisulfide Interchange Protein TlpA; C-Type Cytochrome Biogenesis Protein/Thioredoxin DsbE; Cytochrome C Assembly Protein; Disulfide Reductase Tlpa-Like Family; Thioredoxin-Related Transmembrane Protein; Tat Domain Protein; Peroxiredoxin; Thiol-Disulfide Interchange Protein; ThiolDisulfide Interchange Protein Dsbe; Thiol-Disulfide Oxidoreductase ResA; Thiol-Disulfide Isomerase; ThiolDisulfide Interchange Protein HelX
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTRLRRSLGAGAVGLLLLTGCSSLEGTGDKGYISGDQRVRVVDPADRGSAVELTGTSLTGDPVDVADSRGRVLVVNTWWS GCAPCRSEMPMLTAAAKELGERADFLGINIRDASASQGQAFIRSVGAEYPSIYDPTGKAVLAFAGKTTLSAIPTTIVLDA EGRVAAVITGEIPSKQTLVDVVDEVAANAAAESGGETADG
Sequences:
>Translated_200_residues MTRLRRSLGAGAVGLLLLTGCSSLEGTGDKGYISGDQRVRVVDPADRGSAVELTGTSLTGDPVDVADSRGRVLVVNTWWS GCAPCRSEMPMLTAAAKELGERADFLGINIRDASASQGQAFIRSVGAEYPSIYDPTGKAVLAFAGKTTLSAIPTTIVLDA EGRVAAVITGEIPSKQTLVDVVDEVAANAAAESGGETADG >Mature_199_residues TRLRRSLGAGAVGLLLLTGCSSLEGTGDKGYISGDQRVRVVDPADRGSAVELTGTSLTGDPVDVADSRGRVLVVNTWWSG CAPCRSEMPMLTAAAKELGERADFLGINIRDASASQGQAFIRSVGAEYPSIYDPTGKAVLAFAGKTTLSAIPTTIVLDAE GRVAAVITGEIPSKQTLVDVVDEVAANAAAESGGETADG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20484; Mature: 20353
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLRRSLGAGAVGLLLLTGCSSLEGTGDKGYISGDQRVRVVDPADRGSAVELTGTSLTG CCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCCCCEEEEECCCCCC DPVDVADSRGRVLVVNTWWSGCAPCRSEMPMLTAAAKELGERADFLGINIRDASASQGQA CCCCCCCCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHH FIRSVGAEYPSIYDPTGKAVLAFAGKTTLSAIPTTIVLDAEGRVAAVITGEIPSKQTLVD HHHHHCCCCCCCCCCCCCEEEEEECCCCHHHCCEEEEEECCCCEEEEEECCCCCHHHHHH VVDEVAANAAAESGGETADG HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRLRRSLGAGAVGLLLLTGCSSLEGTGDKGYISGDQRVRVVDPADRGSAVELTGTSLTG CHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCCCCEEEEECCCCCC DPVDVADSRGRVLVVNTWWSGCAPCRSEMPMLTAAAKELGERADFLGINIRDASASQGQA CCCCCCCCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHH FIRSVGAEYPSIYDPTGKAVLAFAGKTTLSAIPTTIVLDAEGRVAAVITGEIPSKQTLVD HHHHHCCCCCCCCCCCCCEEEEEECCCCHHHCCEEEEEECCCCEEEEEECCCCCHHHHHH VVDEVAANAAAESGGETADG HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA