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The map label for this gene is fadM [H]

Identifier: 119714744

GI number: 119714744

Start: 510531

End: 511481

Strand: Direct

Name: fadM [H]

Synonym: Noca_0480

Alternate gene names: 119714744

Gene position: 510531-511481 (Clockwise)

Preceding gene: 119714743

Following gene: 119714745

Centisome position: 10.24

GC content: 69.82

Gene sequence:

>951_bases
ATGTCGCTCCTCCGTCAGCCGCTCCTGCTCCTCGCCCGCAGCTCGCTGGTGAAGAAGGTCGTCAGCGGCATGCCCGTGTC
GGCCGGCATCGTCCGCAGCTACGTCCCGGGCGAGACGACCGAGTCGGCCGTGGGCGCGACCGCGGAGCTCGTGGACGGCG
GTCTGCGGGTCACGCTGGACTACCTGGGTGAGGACACCACCGACGCGGAGCAGGCCGACGCGACGGTCGCGGCGTACCTC
GACGTGCTCCAGGAGCTCTCGGCTCGCGGCCTGACCCGCAACGCCGAGGTCTCGGTGAAGCTCAGCGCCATCGGCCAGTT
CCTCCCCGACGCCGTGGGCTTCGGGGGAGGGGAGAAGATCGCCCTCGAGAACGCCCGCACGATCTGCCGGGCCGCCCGCA
ACGCCGGCACCGCGGTCACCCTCGACATGGAGGACCACACGACCACGGACTCGACGCTGTCGATCCTGCGCGAGCTGCGC
AAGGACTTCCCCGAGACGGGTGCTGTGCTCCAGGCCGCGCTGCACCGGACCGAGAGCGACTGCCGGGCGCTGGCCTACGA
GGGCTCGCGGGTCCGGCTCTGCAAGGGCGCCTACCTCGAGCCGGAGTCCGTCGCCTTCCAGGACCGGCTGGAGATCTCGA
AGTCGTACGTGCGCTGCCTCAAGGTGCTGCTCGCCGGCGAGGGCTACCCGATGATCGCCACCCACGACCCCCGGATGATC
GAGATCGCGTCGTCACTGGCCAGCCGCTACGGCCGCGCGGCCGGGACCTACGAGTACCAGATGCTCTACGGCATCCGCCC
CGAGGAGCAGCGGCGCCTGGTCGCCAGCGGCGAGACGATGCGGGTCTACGTGCCCTACGGCACCGAGTGGTACGGCTACC
TGATGAGAAGGCTCGCGGAGCGTCCGCAGAACCTGTCATTCTTCGTGAAGTCCCTGGTCTCGAAGAAGTGA

Upstream 100 bases:

>100_bases
CTGCGTCGTCGTACTCCCTGATCCTGGCTGACCCTTGGCTGACCCTGGCCCGAGGTGGCCCCGGGACGGCCCTAGGCCGG
CCTCGTCGTAGCCTGAGGTC

Downstream 100 bases:

>100_bases
GACCACAGCGTCCGCGACGAAGGAGCGGACGCGTTGTGGGTGAAGATCGAGCATGCCCCGCGACCGAGGCACGAGGTCGC
GACGGGCGCGTCGAAAGTCC

Product: L-proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSLLRQPLLLLARSSLVKKVVSGMPVSAGIVRSYVPGETTESAVGATAELVDGGLRVTLDYLGEDTTDAEQADATVAAYL
DVLQELSARGLTRNAEVSVKLSAIGQFLPDAVGFGGGEKIALENARTICRAARNAGTAVTLDMEDHTTTDSTLSILRELR
KDFPETGAVLQAALHRTESDCRALAYEGSRVRLCKGAYLEPESVAFQDRLEISKSYVRCLKVLLAGEGYPMIATHDPRMI
EIASSLASRYGRAAGTYEYQMLYGIRPEEQRRLVASGETMRVYVPYGTEWYGYLMRRLAERPQNLSFFVKSLVSKK

Sequences:

>Translated_316_residues
MSLLRQPLLLLARSSLVKKVVSGMPVSAGIVRSYVPGETTESAVGATAELVDGGLRVTLDYLGEDTTDAEQADATVAAYL
DVLQELSARGLTRNAEVSVKLSAIGQFLPDAVGFGGGEKIALENARTICRAARNAGTAVTLDMEDHTTTDSTLSILRELR
KDFPETGAVLQAALHRTESDCRALAYEGSRVRLCKGAYLEPESVAFQDRLEISKSYVRCLKVLLAGEGYPMIATHDPRMI
EIASSLASRYGRAAGTYEYQMLYGIRPEEQRRLVASGETMRVYVPYGTEWYGYLMRRLAERPQNLSFFVKSLVSKK
>Mature_315_residues
SLLRQPLLLLARSSLVKKVVSGMPVSAGIVRSYVPGETTESAVGATAELVDGGLRVTLDYLGEDTTDAEQADATVAAYLD
VLQELSARGLTRNAEVSVKLSAIGQFLPDAVGFGGGEKIALENARTICRAARNAGTAVTLDMEDHTTTDSTLSILRELRK
DFPETGAVLQAALHRTESDCRALAYEGSRVRLCKGAYLEPESVAFQDRLEISKSYVRCLKVLLAGEGYPMIATHDPRMIE
IASSLASRYGRAAGTYEYQMLYGIRPEEQRRLVASGETMRVYVPYGTEWYGYLMRRLAERPQNLSFFVKSLVSKK

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=316, Percent_Identity=29.746835443038, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 34590; Mature: 34459

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLRQPLLLLARSSLVKKVVSGMPVSAGIVRSYVPGETTESAVGATAELVDGGLRVTLD
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHCCCCEEEEH
YLGEDTTDAEQADATVAAYLDVLQELSARGLTRNAEVSVKLSAIGQFLPDAVGFGGGEKI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEE
ALENARTICRAARNAGTAVTLDMEDHTTTDSTLSILRELRKDFPETGAVLQAALHRTESD
EHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
CRALAYEGSRVRLCKGAYLEPESVAFQDRLEISKSYVRCLKVLLAGEGYPMIATHDPRMI
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
EIASSLASRYGRAAGTYEYQMLYGIRPEEQRRLVASGETMRVYVPYGTEWYGYLMRRLAE
HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC
RPQNLSFFVKSLVSKK
CCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SLLRQPLLLLARSSLVKKVVSGMPVSAGIVRSYVPGETTESAVGATAELVDGGLRVTLD
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHCCCCEEEEH
YLGEDTTDAEQADATVAAYLDVLQELSARGLTRNAEVSVKLSAIGQFLPDAVGFGGGEKI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEE
ALENARTICRAARNAGTAVTLDMEDHTTTDSTLSILRELRKDFPETGAVLQAALHRTESD
EHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
CRALAYEGSRVRLCKGAYLEPESVAFQDRLEISKSYVRCLKVLLAGEGYPMIATHDPRMI
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
EIASSLASRYGRAAGTYEYQMLYGIRPEEQRRLVASGETMRVYVPYGTEWYGYLMRRLAE
HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC
RPQNLSFFVKSLVSKK
CCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA