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The map label for this gene is chvE [H]

Identifier: 119714648

GI number: 119714648

Start: 412854

End: 413939

Strand: Direct

Name: chvE [H]

Synonym: Noca_0383

Alternate gene names: 119714648

Gene position: 412854-413939 (Clockwise)

Preceding gene: 119714647

Following gene: 119714649

Centisome position: 8.28

GC content: 66.48

Gene sequence:

>1086_bases
ATGCGCAAGCTACTCACCACGATCGTCGCAGGCAGCCTTGCGCTGACGCTCGCCGCGTGCGGAGGCGACGACGACTCGAA
GGGCGAAGAAGGCTCCGGCGGCGGGGGCACCATCGGTGTCGCGATGCCGACCAAGTCCTCGGAGCGCTGGATCGCCGACG
GCAACAACATCAAGAAGCAGCTGGAGGACGCGGGCTACTCCGTGGACCTGCAGTACGCCGAGGACGACATCCCGACCCAG
GTCTCGCAGGTCGAGAACATGGTCACCAAGGGCGTCGACATGCTGGTCATCGCCGCGATCGACGGCACCGCGCTCGGCGA
GGTGCTCGACACCGCCGCGAGCCAGGACATCGACATCATCTCGTACGACCGTCTGATCCGGGACTCGGAGGCGGTCAGCT
ACTACACGACGTTCGACAACTTCCAGGTCGGCGTGATCCAGGCCCAGTCGCTGGTCGACGGGCTCGCGGCCAAGGGTGAC
GGCCCCTACAACGTCGAGCTGTTCGCGGGCTCGCCCGACGACAACAACGCGACGTTCTTCTGGAACGGCGCCATGTCGAT
CCTGCAGCCGATGCTCGACTCCGGCGAGATCGTGGTCCCCTCCGGCCAGACCGACTTCGACCAGGCCGCGATCCTGCGTT
GGGACCCCGCCACGGCGCAGAAGCGCATGGAGGACATCCTCACCAAGACCTACGCGTCCAAGACGGTCGACGGGGTTCTC
TCGCCGTACGACGGCCTCTCGCTCGGCATCATCGCCGCGCTCCAGGGCAACGGCTACGGCGGCGGCGGCAAGGAGCTGCC
GGTCGTGACCGGCCAGGACGCCGAGGTGCAGTCGGTCAAGTCGATCATGGCCGGGGAGCAGTACTCGACCGTGTTCAAGG
ACACCCGCGACCTCGCCGAGGTCACCGTCGACATGATCAAGGCGCTGAGCGCGGGCGACGAGCCCGAGGTCAACGACACC
GAGACCTACGACAACGGCGTGAAGGTCGTTCCGTCCTACCTGCTCGACCCGGTCCTCGTGACCAAGGACAACGTGCAGAC
CGCGCTCGTCGACACCGGGTACTACACCGCGGACGAGCTGAAGTGA

Upstream 100 bases:

>100_bases
CGGCGTACCACCGACTGGCGCAGGGACTGTGATGCGTCCCGCGGCCGGAGCAGGGTGTGGGACGGACCTGCGCCCCCAGG
TAGTGATATGGAGAAGGTGC

Downstream 100 bases:

>100_bases
TCCCCCCGTGGGCGGGCCCGGTGATCCTGGGCCCGCCCACGGGCTACCAACCCTGAGTGACCGAGGAGGTGACCCATGGC
CCAGCCGATCCTGGAGATGC

Product: xylose ABC transporter, substrate-binding protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRKLLTTIVAGSLALTLAACGGDDDSKGEEGSGGGGTIGVAMPTKSSERWIADGNNIKKQLEDAGYSVDLQYAEDDIPTQ
VSQVENMVTKGVDMLVIAAIDGTALGEVLDTAASQDIDIISYDRLIRDSEAVSYYTTFDNFQVGVIQAQSLVDGLAAKGD
GPYNVELFAGSPDDNNATFFWNGAMSILQPMLDSGEIVVPSGQTDFDQAAILRWDPATAQKRMEDILTKTYASKTVDGVL
SPYDGLSLGIIAALQGNGYGGGGKELPVVTGQDAEVQSVKSIMAGEQYSTVFKDTRDLAEVTVDMIKALSAGDEPEVNDT
ETYDNGVKVVPSYLLDPVLVTKDNVQTALVDTGYYTADELK

Sequences:

>Translated_361_residues
MRKLLTTIVAGSLALTLAACGGDDDSKGEEGSGGGGTIGVAMPTKSSERWIADGNNIKKQLEDAGYSVDLQYAEDDIPTQ
VSQVENMVTKGVDMLVIAAIDGTALGEVLDTAASQDIDIISYDRLIRDSEAVSYYTTFDNFQVGVIQAQSLVDGLAAKGD
GPYNVELFAGSPDDNNATFFWNGAMSILQPMLDSGEIVVPSGQTDFDQAAILRWDPATAQKRMEDILTKTYASKTVDGVL
SPYDGLSLGIIAALQGNGYGGGGKELPVVTGQDAEVQSVKSIMAGEQYSTVFKDTRDLAEVTVDMIKALSAGDEPEVNDT
ETYDNGVKVVPSYLLDPVLVTKDNVQTALVDTGYYTADELK
>Mature_361_residues
MRKLLTTIVAGSLALTLAACGGDDDSKGEEGSGGGGTIGVAMPTKSSERWIADGNNIKKQLEDAGYSVDLQYAEDDIPTQ
VSQVENMVTKGVDMLVIAAIDGTALGEVLDTAASQDIDIISYDRLIRDSEAVSYYTTFDNFQVGVIQAQSLVDGLAAKGD
GPYNVELFAGSPDDNNATFFWNGAMSILQPMLDSGEIVVPSGQTDFDQAAILRWDPATAQKRMEDILTKTYASKTVDGVL
SPYDGLSLGIIAALQGNGYGGGGKELPVVTGQDAEVQSVKSIMAGEQYSTVFKDTRDLAEVTVDMIKALSAGDEPEVNDT
ETYDNGVKVVPSYLLDPVLVTKDNVQTALVDTGYYTADELK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=323, Percent_Identity=37.4613003095975, Blast_Score=185, Evalue=4e-48,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38264; Mature: 38264

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLTTIVAGSLALTLAACGGDDDSKGEEGSGGGGTIGVAMPTKSSERWIADGNNIKKQ
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCHHHHHH
LEDAGYSVDLQYAEDDIPTQVSQVENMVTKGVDMLVIAAIDGTALGEVLDTAASQDIDII
HHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEE
SYDRLIRDSEAVSYYTTFDNFQVGVIQAQSLVDGLAAKGDGPYNVELFAGSPDDNNATFF
EHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEE
WNGAMSILQPMLDSGEIVVPSGQTDFDQAAILRWDPATAQKRMEDILTKTYASKTVDGVL
ECCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
SPYDGLSLGIIAALQGNGYGGGGKELPVVTGQDAEVQSVKSIMAGEQYSTVFKDTRDLAE
CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VTVDMIKALSAGDEPEVNDTETYDNGVKVVPSYLLDPVLVTKDNVQTALVDTGYYTADEL
HHHHHHHHHCCCCCCCCCCCCCCCCCHHEEHHHHCCCEEEECCCCEEEEEECCCCCHHCC
K
C
>Mature Secondary Structure
MRKLLTTIVAGSLALTLAACGGDDDSKGEEGSGGGGTIGVAMPTKSSERWIADGNNIKKQ
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCHHHHHH
LEDAGYSVDLQYAEDDIPTQVSQVENMVTKGVDMLVIAAIDGTALGEVLDTAASQDIDII
HHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEE
SYDRLIRDSEAVSYYTTFDNFQVGVIQAQSLVDGLAAKGDGPYNVELFAGSPDDNNATFF
EHHHHHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEE
WNGAMSILQPMLDSGEIVVPSGQTDFDQAAILRWDPATAQKRMEDILTKTYASKTVDGVL
ECCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
SPYDGLSLGIIAALQGNGYGGGGKELPVVTGQDAEVQSVKSIMAGEQYSTVFKDTRDLAE
CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VTVDMIKALSAGDEPEVNDTETYDNGVKVVPSYLLDPVLVTKDNVQTALVDTGYYTADEL
HHHHHHHHHCCCCCCCCCCCCCCCCCHHEEHHHHCCCEEEECCCCEEEEEECCCCCHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]