| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is actP [H]
Identifier: 119714621
GI number: 119714621
Start: 380814
End: 382331
Strand: Reverse
Name: actP [H]
Synonym: Noca_0355
Alternate gene names: 119714621
Gene position: 382331-380814 (Counterclockwise)
Preceding gene: 119714622
Following gene: 119714614
Centisome position: 7.67
GC content: 74.31
Gene sequence:
>1518_bases GTGAGCACCGGGCTGGACGCCGCCCCTGGCATCGTCGCGGTGGCGGTGGTGACGATCGCGACGCTGGTCATCGGCACCTG GGGGCTGCGGTTCTCCCGTACGACGAGCGACTTCTTCGTGGCCTCGCGCACGGTCCGGCCGCGGCTGAACGCGAGTGCGA TCGGCGGCGAGTACCTCTCGGCCGCCTCCTTCCTCGGCGTCGCCGGGCTGGTGCTGACCTTCGGCGCCGACATGCTGTGG TACCCCGTCGGCTGGACCGCCGGCTACCTCGTGCTGCTGGTGCTGGTCGCCGCGCCGCTGCGCCGCTCGGGTGCGTACAC GCTGCCGGACTTCGCCGAGGCGCGGCTCGGGTCGCGCTCGGTGCGCGCGGTCTGCTCGCTGCTCGTCGTCGCCGTCGGCT GGCTCTACCTGTTGCCGCAGTTCCAGGGCGCCGGCATCACGCTGCGCTCGACCCTCGGGGCCCCCACCTGGGTCGGGCCG GTGATCGTCGGCCTGGTCGTGTTGGCGAACGTCACCTCGGGCGGGATGCGCAGCATCACGTTCGTCCAGGCCTTCCAGTA CTGGCTCAAGCTCACCGCTCTCCTGGTCCCGGGGGCGGTGCTGCTGGTCGTCTGGGCCGGCGACTCCGCTCCGCTGCGGG CGGGCTCCGACGGGTGGTCGGTGCCCCTGGCGGCGGGCGGCAACCAGGGCCTCTACGTGACCTACTCGCTGATCATCGCG ACGTTCCTGGGCACCATGGGGCTGCCGCACGTGGTCGTCCGCTTCTACACCAACCCCGACGGTCGCGCGGCCCGCCGTAC GACGCTCGTCGTGCTGGCGCTGCTCGGCGTGTTCTACCTGCTGCCGCCGCTGTACGGCGCCCTCGGGCGGGTCTACGCGC CCTCGCTCGCCGAGTCCGGGCGCTCGGACGCGCTGGTGCTCGAGCTCCCCCGGATCATGCTCGACGGGCCGGCCGGGGAG GTGCTCACCGGGCTGGTGACCGCGGGCGCGTTCGCCGCGTTCCTCTCCACGTCCTCCGGACTGTCGATCGCGGTGTCCGG CGTGCTCAGCCAGGACGTGACCGGCCGCCCGTGGGCCGGCCGGCGGCTCGGCGGAGTCGCGGCGTTCCGGGTGGGGGCGG TCGTCGCGGTCACCGTGCCGTGCGTGGTGGCGCTCGCGGCGCCGAACCTCGGCGTCGCCCGGGCGGTCGGGTTGGCCTTC GCGATGGCCGCTTCGACGTTCTGCCCGCTGCTGCTGCTCGGGATCTGGTGGCGCCGGCTCACCCCCGCCGGTGCGTTGGC GGGGCTGCTGGCCGGCGGCGTCGGCAGCGGCGTCGCCATCGCGTGGACGCTCGCCACGTCCCGTCCCTCGGGCTGGGCCG ACGCGCTCATGGGCCAACCCGCCGCCTGGACCTTCCCCCTCGCGCTGACCACGATGGTCGTCGTGTCGCTGGCGACCGCC CACCGGATCCCCACCCACGCCGGCCGGTTCCTGGTGCGCCTGCACACCCCCGAGACGCTCGGCCTGGACCGCAGCTGA
Upstream 100 bases:
>100_bases TGCTCGCCTACCCGACGCTGCTGCTCCTCGGCTGGGTCTACGTCCGGCGGGCCGAGCGCAACGAGCGCGACTTCGCCGAG CTGGTCTCGGAGGTGGAGGG
Downstream 100 bases:
>100_bases CCCAGGTAGCGCGGGGCGGCCGGGCTCAGGAGGCGACGGCCAGCCGGTAGCCGCGCTTGACGACGGTCTGGACGGTGCGA GTGCCGAGGGCCGCGCGCAG
Product: Na+/solute symporter
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSTGLDAAPGIVAVAVVTIATLVIGTWGLRFSRTTSDFFVASRTVRPRLNASAIGGEYLSAASFLGVAGLVLTFGADMLW YPVGWTAGYLVLLVLVAAPLRRSGAYTLPDFAEARLGSRSVRAVCSLLVVAVGWLYLLPQFQGAGITLRSTLGAPTWVGP VIVGLVVLANVTSGGMRSITFVQAFQYWLKLTALLVPGAVLLVVWAGDSAPLRAGSDGWSVPLAAGGNQGLYVTYSLIIA TFLGTMGLPHVVVRFYTNPDGRAARRTTLVVLALLGVFYLLPPLYGALGRVYAPSLAESGRSDALVLELPRIMLDGPAGE VLTGLVTAGAFAAFLSTSSGLSIAVSGVLSQDVTGRPWAGRRLGGVAAFRVGAVVAVTVPCVVALAAPNLGVARAVGLAF AMAASTFCPLLLLGIWWRRLTPAGALAGLLAGGVGSGVAIAWTLATSRPSGWADALMGQPAAWTFPLALTTMVVVSLATA HRIPTHAGRFLVRLHTPETLGLDRS
Sequences:
>Translated_505_residues MSTGLDAAPGIVAVAVVTIATLVIGTWGLRFSRTTSDFFVASRTVRPRLNASAIGGEYLSAASFLGVAGLVLTFGADMLW YPVGWTAGYLVLLVLVAAPLRRSGAYTLPDFAEARLGSRSVRAVCSLLVVAVGWLYLLPQFQGAGITLRSTLGAPTWVGP VIVGLVVLANVTSGGMRSITFVQAFQYWLKLTALLVPGAVLLVVWAGDSAPLRAGSDGWSVPLAAGGNQGLYVTYSLIIA TFLGTMGLPHVVVRFYTNPDGRAARRTTLVVLALLGVFYLLPPLYGALGRVYAPSLAESGRSDALVLELPRIMLDGPAGE VLTGLVTAGAFAAFLSTSSGLSIAVSGVLSQDVTGRPWAGRRLGGVAAFRVGAVVAVTVPCVVALAAPNLGVARAVGLAF AMAASTFCPLLLLGIWWRRLTPAGALAGLLAGGVGSGVAIAWTLATSRPSGWADALMGQPAAWTFPLALTTMVVVSLATA HRIPTHAGRFLVRLHTPETLGLDRS >Mature_504_residues STGLDAAPGIVAVAVVTIATLVIGTWGLRFSRTTSDFFVASRTVRPRLNASAIGGEYLSAASFLGVAGLVLTFGADMLWY PVGWTAGYLVLLVLVAAPLRRSGAYTLPDFAEARLGSRSVRAVCSLLVVAVGWLYLLPQFQGAGITLRSTLGAPTWVGPV IVGLVVLANVTSGGMRSITFVQAFQYWLKLTALLVPGAVLLVVWAGDSAPLRAGSDGWSVPLAAGGNQGLYVTYSLIIAT FLGTMGLPHVVVRFYTNPDGRAARRTTLVVLALLGVFYLLPPLYGALGRVYAPSLAESGRSDALVLELPRIMLDGPAGEV LTGLVTAGAFAAFLSTSSGLSIAVSGVLSQDVTGRPWAGRRLGGVAAFRVGAVVAVTVPCVVALAAPNLGVARAVGLAFA MAASTFCPLLLLGIWWRRLTPAGALAGLLAGGVGSGVAIAWTLATSRPSGWADALMGQPAAWTFPLALTTMVVVSLATAH RIPTHAGRFLVRLHTPETLGLDRS
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=487, Percent_Identity=23.8193018480493, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790503, Length=440, Percent_Identity=31.1363636363636, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1787251, Length=451, Percent_Identity=24.8337028824834, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87082237, Length=447, Percent_Identity=25.2796420581655, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 52230; Mature: 52099
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGLDAAPGIVAVAVVTIATLVIGTWGLRFSRTTSDFFVASRTVRPRLNASAIGGEYLS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCHHCCHHHHH AASFLGVAGLVLTFGADMLWYPVGWTAGYLVLLVLVAAPLRRSGAYTLPDFAEARLGSRS HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHH VRAVCSLLVVAVGWLYLLPQFQGAGITLRSTLGAPTWVGPVIVGLVVLANVTSGGMRSIT HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH FVQAFQYWLKLTALLVPGAVLLVVWAGDSAPLRAGSDGWSVPLAAGGNQGLYVTYSLIIA HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHH TFLGTMGLPHVVVRFYTNPDGRAARRTTLVVLALLGVFYLLPPLYGALGRVYAPSLAESG HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC RSDALVLELPRIMLDGPAGEVLTGLVTAGAFAAFLSTSSGLSIAVSGVLSQDVTGRPWAG CCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCC RRLGGVAAFRVGAVVAVTVPCVVALAAPNLGVARAVGLAFAMAASTFCPLLLLGIWWRRL CHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPAGALAGLLAGGVGSGVAIAWTLATSRPSGWADALMGQPAAWTFPLALTTMVVVSLATA CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHH HRIPTHAGRFLVRLHTPETLGLDRS HCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure STGLDAAPGIVAVAVVTIATLVIGTWGLRFSRTTSDFFVASRTVRPRLNASAIGGEYLS CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCHHCCHHHHH AASFLGVAGLVLTFGADMLWYPVGWTAGYLVLLVLVAAPLRRSGAYTLPDFAEARLGSRS HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHH VRAVCSLLVVAVGWLYLLPQFQGAGITLRSTLGAPTWVGPVIVGLVVLANVTSGGMRSIT HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH FVQAFQYWLKLTALLVPGAVLLVVWAGDSAPLRAGSDGWSVPLAAGGNQGLYVTYSLIIA HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHH TFLGTMGLPHVVVRFYTNPDGRAARRTTLVVLALLGVFYLLPPLYGALGRVYAPSLAESG HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC RSDALVLELPRIMLDGPAGEVLTGLVTAGAFAAFLSTSSGLSIAVSGVLSQDVTGRPWAG CCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCC RRLGGVAAFRVGAVVAVTVPCVVALAAPNLGVARAVGLAFAMAASTFCPLLLLGIWWRRL CHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPAGALAGLLAGGVGSGVAIAWTLATSRPSGWADALMGQPAAWTFPLALTTMVVVSLATA CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHH HRIPTHAGRFLVRLHTPETLGLDRS HCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]