| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714603
Identifier: 119714603
GI number: 119714603
Start: 359462
End: 360334
Strand: Direct
Name: 119714603
Synonym: Noca_0337
Alternate gene names: NA
Gene position: 359462-360334 (Clockwise)
Preceding gene: 119714602
Following gene: 119714604
Centisome position: 7.21
GC content: 74.23
Gene sequence:
>873_bases GTGAGGATCCCGATCCCGCCGATCCCGCTCCCGGAGCAGATCGTCGAGCTCGCCCGCGAGTACGACGACGGCAGGCGCGA CCCGGCCGAGCCCCGGGACGCGGCCACCGTGATCCTGGTCCGCCCCTCCGACCACGGTCCGGCGGTGTACTACCTGCGCC GGCACACCACGATGGAGTTCGCCGGGGGCATGTGCGTGTACCCCGGCGGTGGGGTGGACCCCCGCGACTTCGACACGACC GTCGCCTGGGCCGGTCCCGCGCCTGCCGAGTGGGCCGAGCGCCTGGGCTGCGACGAGGAGATGGCGCGCGCGCTGGTGTG CGCGGCGGTGCGCGAGACCTTCGAGGAGTCCGGCGTCCTGCTGGCCGGGCCGTCCGCCGATGAGGTCGTCGCCGACACCA CGGGCGAGGACTGGGAGGCCGACCGGCACGCCCTGGAGTCGCGGGAGCTCGCGATGACCGCGTTCCTCTCCGCACGGGGC CTGGTGCTGCGCACCGACCTGCTCGGTGTCTGGGGCGGCTGGCTGACCCCCGCCTTCGAGCCGAAGCGCTACCGCACCTG GTTCTTCGTCGCGCTGCTGCCCGAGGGGCAGCGGACCCGGGACGTCTCGACCGAGTCCGAGTCAGTGACCTGGCTGCCGG CAGCCGACGCGGTGGCCCAGGCCGAGCGCGGCGAGATGCTGATGATGCCGCCGACGTATCTCACCTCGCTCGAGGTCGCG CAGCTCGCCACCCCGGACGAGGTGATCGTGGCGGCGCACGGCCGGGTGGTGGAGATGCACACCCCCGTCGTCGAGCCGCT CGACGGCGAGGGCTGGACGCTGTCCGTGCCGGCCCACCACCGCTCGATCCTGGCCGCGCACCGCGGCGCCTGA
Upstream 100 bases:
>100_bases GGCGCGCACGCCCGCTCCGCCGTCGGCGTGCCGGTGCTGCCGCTGGATGCGCCCGTCGAGGTCGAGATCGTGGTGCGGGT GGCCTCGTGAGACCGGCGCC
Downstream 100 bases:
>100_bases CGTGGCGCCCGACGCGGCCTGGGCCGGCGGCGCCTTCGGGGCGCGGGGTAGGTGCGTGCTCGCCGCCAACCCCGGCCCGA TGACCCTCGACGGGACCAAC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; NUDIX Family Hydrolase; NUDIX Family Protein; Beta-Lactamase-Like; Phosphohydrolase; Beta-Lactamase Domain Protein; NUDIX Domain-Containing Protein; Beta-Lactamase-Like Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; NUDIX Protein; NUDIX/MutT Family Hydrolase; Nudix Hydrolase; Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Nudix Superfamily Hydrolase; Hydrolase NUDIX Family Domain Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRIPIPPIPLPEQIVELAREYDDGRRDPAEPRDAATVILVRPSDHGPAVYYLRRHTTMEFAGGMCVYPGGGVDPRDFDTT VAWAGPAPAEWAERLGCDEEMARALVCAAVRETFEESGVLLAGPSADEVVADTTGEDWEADRHALESRELAMTAFLSARG LVLRTDLLGVWGGWLTPAFEPKRYRTWFFVALLPEGQRTRDVSTESESVTWLPAADAVAQAERGEMLMMPPTYLTSLEVA QLATPDEVIVAAHGRVVEMHTPVVEPLDGEGWTLSVPAHHRSILAAHRGA
Sequences:
>Translated_290_residues MRIPIPPIPLPEQIVELAREYDDGRRDPAEPRDAATVILVRPSDHGPAVYYLRRHTTMEFAGGMCVYPGGGVDPRDFDTT VAWAGPAPAEWAERLGCDEEMARALVCAAVRETFEESGVLLAGPSADEVVADTTGEDWEADRHALESRELAMTAFLSARG LVLRTDLLGVWGGWLTPAFEPKRYRTWFFVALLPEGQRTRDVSTESESVTWLPAADAVAQAERGEMLMMPPTYLTSLEVA QLATPDEVIVAAHGRVVEMHTPVVEPLDGEGWTLSVPAHHRSILAAHRGA >Mature_290_residues MRIPIPPIPLPEQIVELAREYDDGRRDPAEPRDAATVILVRPSDHGPAVYYLRRHTTMEFAGGMCVYPGGGVDPRDFDTT VAWAGPAPAEWAERLGCDEEMARALVCAAVRETFEESGVLLAGPSADEVVADTTGEDWEADRHALESRELAMTAFLSARG LVLRTDLLGVWGGWLTPAFEPKRYRTWFFVALLPEGQRTRDVSTESESVTWLPAADAVAQAERGEMLMMPPTYLTSLEVA QLATPDEVIVAAHGRVVEMHTPVVEPLDGEGWTLSVPAHHRSILAAHRGA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31759; Mature: 31759
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPIPPIPLPEQIVELAREYDDGRRDPAEPRDAATVILVRPSDHGPAVYYLRRHTTMEF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHH AGGMCVYPGGGVDPRDFDTTVAWAGPAPAEWAERLGCDEEMARALVCAAVRETFEESGVL CCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEE LAGPSADEVVADTTGEDWEADRHALESRELAMTAFLSARGLVLRTDLLGVWGGWLTPAFE EECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCC PKRYRTWFFVALLPEGQRTRDVSTESESVTWLPAADAVAQAERGEMLMMPPTYLTSLEVA CCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCEEEECCHHHHHHHHH QLATPDEVIVAAHGRVVEMHTPVVEPLDGEGWTLSVPAHHRSILAAHRGA HHCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHCCCC >Mature Secondary Structure MRIPIPPIPLPEQIVELAREYDDGRRDPAEPRDAATVILVRPSDHGPAVYYLRRHTTMEF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHH AGGMCVYPGGGVDPRDFDTTVAWAGPAPAEWAERLGCDEEMARALVCAAVRETFEESGVL CCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEE LAGPSADEVVADTTGEDWEADRHALESRELAMTAFLSARGLVLRTDLLGVWGGWLTPAFE EECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCC PKRYRTWFFVALLPEGQRTRDVSTESESVTWLPAADAVAQAERGEMLMMPPTYLTSLEVA CCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCEEEECCHHHHHHHHH QLATPDEVIVAAHGRVVEMHTPVVEPLDGEGWTLSVPAHHRSILAAHRGA HHCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA