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The map label for this gene is yedY [H]

Identifier: 119714582

GI number: 119714582

Start: 337850

End: 339403

Strand: Reverse

Name: yedY [H]

Synonym: Noca_0316

Alternate gene names: 119714582

Gene position: 339403-337850 (Counterclockwise)

Preceding gene: 119714589

Following gene: 119714577

Centisome position: 6.81

GC content: 67.25

Gene sequence:

>1554_bases
ATGATGATGCACCCGATTCTGCAGGCCGCCACGTCCTCGACGGAGCTCGGCTTCCCGTGGTGGCTGCAGGTGACCCACCT
GGTCAACTTCTTGTTCCTGGGTCTGCTGGTCCGGTCCGGCTGGGAGATCCTCGCCTCGCACCCGCGGCTCTACTGGCGCA
ACGACTGCGGGCCGGACACCGAGTGGCTGAAGTTCACCAAGGACAAGGTTCCCTCGGAGATCGGGGCCTTCACCGCACGT
GATGACCAGCGCGACCTGCACCCGCTGATCAGTCTCCCGGGCCGGGCCAAGATCGGCATCGGTCGCGCCTGGCACGGGTT
GATCACCACCCTGTGGGTGCTCAACGGGCTCATCTACGTGGTGCTGCTGTTCGGCACCGGCCAGTGGCGACGACTGATCC
CGACCTCGTGGAGCGTGTTCCCGGAGGCCTGGGACTCGCTGAAGATCTACGCCGGATTCGGGGTCCCCTCGATCGAGCAC
TTCCAGCCGTACGACGCCCTGCAGCAGCTGATGTACACGTTCGTGGTGTTCGTGCTGGCGCCGCTGATGATCGTCACCGG
TCCGGTGATGTCGCCGGCGGTCGTGGGCCGCTACCCGTGGTACCCGAAGCTCTTCGGCGGCCGCCAGGCCGCGCGCTCGC
TGCACTTCCTCGGCATGGCGTTCTTCGTGGTGTTCGCGGTCATGCACGTCGCGCTCGTGCTCCTGGTGCACCGCGAGCAC
AACCTCGTGCACATGATGATGGGCGAGGAGTACGACGCCGCCCTGGTCGGCCAGGCCGTCACCCGGGTGATCGTCGGGGT
CGTCGTGGTGGTCGCGCTGTGGATCGCGGCGTCGTACGTCTCGCTGATCGACGTGCGGAAGAGCCAGCGGGTGCTCTACG
GCCTGCAGGCGCCGATCAAGAAGCTCGTGCTGAACCCGATGACCTCGCGGCAGCGGGCCCGGCAGGTGTTCACCGAGGAC
GACATCTCGCCGTTCCACTGGGTCAACACCCGGCCGCCGGACCTGAGCCAGTCGCCGGAGTGGCTCGCGCTGCGCGACGG
CGGCTTCCGCGACTTCCGGCTCGAGGTCGGCGGCCTGGTCCGGGAACCGCGGTCCTTCTCGCTCGACGAGCTCAGGGAGA
TCGCGGCCCAGGACCAGATCACCATGCACACCTGCATGCAGGGCTGGACCGGCATCGCGAAGTGGTCGGGTATCCCGCTG
CGTGAGGTGCTCGCCCAGGTCGAGCCGCTCGAAGGCGCCGACTACGTGATGATCGAGTCCTTCGGGACCGCCCAGCACAT
GCACGACGGACGGCCGGTGGAGCCCTACTACACCGTGCTCACCAAGGCGATGGCGATGGAGGACGAGACGATCCTCGCCT
GGGGCATGAACGGTGCGCCGCTGCCCGAGATGTACGGCGCCCCGCTGCGGCTGCGCACCGAGTCCATGCACGGCTACAAG
ATGGTCAAGTGGGTCCGTTCGGTGTCCTGGATCCATGACTACAAGGAGGTCGGCGACGGGATGGGCGGCACCCGCGAGGA
CTCCGGCTACCAGGACATGGACGCCAGGATCTGA

Upstream 100 bases:

>100_bases
CCGGGTCGCCCGGCCAGGTCCGACCGACGCTCGATGTCGCTATGGTCGGGATGCCCCTTCGCACCCGCGGCGTCCGGGCC
GCACCGGAGAAACGGAGCGC

Downstream 100 bases:

>100_bases
GCTGTCGTCGTCCCCGGGCGAAGCTCGGGGACGACGACCCGGACGAGCGGCGGCCGGCCCGCCACCGGTAGGGCCGCGCC
GATCCGCTCAGGACAGCATC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MMMHPILQAATSSTELGFPWWLQVTHLVNFLFLGLLVRSGWEILASHPRLYWRNDCGPDTEWLKFTKDKVPSEIGAFTAR
DDQRDLHPLISLPGRAKIGIGRAWHGLITTLWVLNGLIYVVLLFGTGQWRRLIPTSWSVFPEAWDSLKIYAGFGVPSIEH
FQPYDALQQLMYTFVVFVLAPLMIVTGPVMSPAVVGRYPWYPKLFGGRQAARSLHFLGMAFFVVFAVMHVALVLLVHREH
NLVHMMMGEEYDAALVGQAVTRVIVGVVVVVALWIAASYVSLIDVRKSQRVLYGLQAPIKKLVLNPMTSRQRARQVFTED
DISPFHWVNTRPPDLSQSPEWLALRDGGFRDFRLEVGGLVREPRSFSLDELREIAAQDQITMHTCMQGWTGIAKWSGIPL
REVLAQVEPLEGADYVMIESFGTAQHMHDGRPVEPYYTVLTKAMAMEDETILAWGMNGAPLPEMYGAPLRLRTESMHGYK
MVKWVRSVSWIHDYKEVGDGMGGTREDSGYQDMDARI

Sequences:

>Translated_517_residues
MMMHPILQAATSSTELGFPWWLQVTHLVNFLFLGLLVRSGWEILASHPRLYWRNDCGPDTEWLKFTKDKVPSEIGAFTAR
DDQRDLHPLISLPGRAKIGIGRAWHGLITTLWVLNGLIYVVLLFGTGQWRRLIPTSWSVFPEAWDSLKIYAGFGVPSIEH
FQPYDALQQLMYTFVVFVLAPLMIVTGPVMSPAVVGRYPWYPKLFGGRQAARSLHFLGMAFFVVFAVMHVALVLLVHREH
NLVHMMMGEEYDAALVGQAVTRVIVGVVVVVALWIAASYVSLIDVRKSQRVLYGLQAPIKKLVLNPMTSRQRARQVFTED
DISPFHWVNTRPPDLSQSPEWLALRDGGFRDFRLEVGGLVREPRSFSLDELREIAAQDQITMHTCMQGWTGIAKWSGIPL
REVLAQVEPLEGADYVMIESFGTAQHMHDGRPVEPYYTVLTKAMAMEDETILAWGMNGAPLPEMYGAPLRLRTESMHGYK
MVKWVRSVSWIHDYKEVGDGMGGTREDSGYQDMDARI
>Mature_517_residues
MMMHPILQAATSSTELGFPWWLQVTHLVNFLFLGLLVRSGWEILASHPRLYWRNDCGPDTEWLKFTKDKVPSEIGAFTAR
DDQRDLHPLISLPGRAKIGIGRAWHGLITTLWVLNGLIYVVLLFGTGQWRRLIPTSWSVFPEAWDSLKIYAGFGVPSIEH
FQPYDALQQLMYTFVVFVLAPLMIVTGPVMSPAVVGRYPWYPKLFGGRQAARSLHFLGMAFFVVFAVMHVALVLLVHREH
NLVHMMMGEEYDAALVGQAVTRVIVGVVVVVALWIAASYVSLIDVRKSQRVLYGLQAPIKKLVLNPMTSRQRARQVFTED
DISPFHWVNTRPPDLSQSPEWLALRDGGFRDFRLEVGGLVREPRSFSLDELREIAAQDQITMHTCMQGWTGIAKWSGIPL
REVLAQVEPLEGADYVMIESFGTAQHMHDGRPVEPYYTVLTKAMAMEDETILAWGMNGAPLPEMYGAPLRLRTESMHGYK
MVKWVRSVSWIHDYKEVGDGMGGTREDSGYQDMDARI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=144, Percent_Identity=29.8611111111111, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 58599; Mature: 58599

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMHPILQAATSSTELGFPWWLQVTHLVNFLFLGLLVRSGWEILASHPRLYWRNDCGPDT
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCH
EWLKFTKDKVPSEIGAFTARDDQRDLHPLISLPGRAKIGIGRAWHGLITTLWVLNGLIYV
HHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
VLLFGTGQWRRLIPTSWSVFPEAWDSLKIYAGFGVPSIEHFQPYDALQQLMYTFVVFVLA
HHHHCCCCCCCCCCCCCHHCHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
PLMIVTGPVMSPAVVGRYPWYPKLFGGRQAARSLHFLGMAFFVVFAVMHVALVLLVHREH
HHHHHHCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLVHMMMGEEYDAALVGQAVTRVIVGVVVVVALWIAASYVSLIDVRKSQRVLYGLQAPIK
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVLNPMTSRQRARQVFTEDDISPFHWVNTRPPDLSQSPEWLALRDGGFRDFRLEVGGLV
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHH
REPRSFSLDELREIAAQDQITMHTCMQGWTGIAKWSGIPLREVLAQVEPLEGADYVMIES
CCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCCCCCCCEEEEEC
FGTAQHMHDGRPVEPYYTVLTKAMAMEDETILAWGMNGAPLPEMYGAPLRLRTESMHGYK
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCEEEEECCCCHHH
MVKWVRSVSWIHDYKEVGDGMGGTREDSGYQDMDARI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMMHPILQAATSSTELGFPWWLQVTHLVNFLFLGLLVRSGWEILASHPRLYWRNDCGPDT
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCH
EWLKFTKDKVPSEIGAFTARDDQRDLHPLISLPGRAKIGIGRAWHGLITTLWVLNGLIYV
HHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
VLLFGTGQWRRLIPTSWSVFPEAWDSLKIYAGFGVPSIEHFQPYDALQQLMYTFVVFVLA
HHHHCCCCCCCCCCCCCHHCHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
PLMIVTGPVMSPAVVGRYPWYPKLFGGRQAARSLHFLGMAFFVVFAVMHVALVLLVHREH
HHHHHHCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLVHMMMGEEYDAALVGQAVTRVIVGVVVVVALWIAASYVSLIDVRKSQRVLYGLQAPIK
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVLNPMTSRQRARQVFTEDDISPFHWVNTRPPDLSQSPEWLALRDGGFRDFRLEVGGLV
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHH
REPRSFSLDELREIAAQDQITMHTCMQGWTGIAKWSGIPLREVLAQVEPLEGADYVMIES
CCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCCCCCCCEEEEEC
FGTAQHMHDGRPVEPYYTVLTKAMAMEDETILAWGMNGAPLPEMYGAPLRLRTESMHGYK
CCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCEEEEECCCCHHH
MVKWVRSVSWIHDYKEVGDGMGGTREDSGYQDMDARI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]