| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714576
Identifier: 119714576
GI number: 119714576
Start: 329399
End: 330673
Strand: Direct
Name: 119714576
Synonym: Noca_0309
Alternate gene names: NA
Gene position: 329399-330673 (Clockwise)
Preceding gene: 119714575
Following gene: 119714578
Centisome position: 6.61
GC content: 77.57
Gene sequence:
>1275_bases GTGCGCGTGACCGCGGCCGCCGTCGGCACGGCCGTCGTGGTCGCGGTGCTCGGCTCCGCCCCGGCCGCCCCGGCCGCCCC GGCCGCCGCGGCCGCGGTTCCACCGTCGTGCGCGGACTTCCAGCCCGAGATGCCGGTGGAGCAGTACGACGGGGCCAGCG AGCCGCTGCGGCTGCTCGGGGTCGAGAAGGCACAGCACGTGCTCGCCGGACCGGGCCGTCCGGGAGCAGGGGTCGCCGTG GCCGTCCTGGACTCGGGGGTGCGTCGCGGCCCGGGAATGGACGTGGTCGCCGGCCCGAACCTCGCCGGGCTCGACGAGCT CGTCGACTGGCACGGGACCGCCGTCGCGGGGATCATCGCGGGCGCACCCCTGCCGGACGGCTCGCCGGTCGGGATCGCCC CAGGAGCCCGGATCGTCGACGTCCGCGTCTACGACAGCCGCGACCCCCAGTCGGACCGTGGCGAGCAGCCGGTCACTCCG GCGTCGGTCGCCGCGGGCCTGGACTGGGTGGCGCGGTTCGCCCGGGACCGGGGCATCGGCGTCGCCAACGTCTCCGCCGC CGTCCCTGCCTCACCAGCGCTGGCGGCGGCAGTGCGGCGGGCCTGGCGGGCCGGCGTGGTGGTGGTCGCCGCCACCGGCA ACCGGCCCGAGGAGGGCGGCTTCTTGTTCCCGGAGCTCGGCGGCGAGGAGCGGCGGCCGGGGGAGGACGCCGCCGGCGAG GTCTTCCCCGCCGGCTATCCGCACGTGGTCGGTGTCAACGCCACCCGGACCGGCGAGCCCAGCGGCAGCCCGGTGACGGA CTTCGTCCTGCCCAGCTCCGACACCGACGTCGCGGCGCCGACGTACGGCGCCCTCTCGGTGGCCGTCAACGGCGCGACCT GCGTGATCCCCGAGGTCGCGACGTCGTGGTCGGCCGCCGAGGTCAGCGGGGTGCTCGCGCTGCTGCGCTCGCACTACCCT CGCGACCGGCCCGCGCAGGCGGTGGCCCGGCTGCTCAACACCGCCAACGGCACCACCGCGGCGCCCACCCGGCTCACCGG GGTCGGCGTCGTCCAGCCCTACCAGGCACTGACCCGGCCCCTCGAGCCGCGGCCCGACGGCGCGGTCGAGCTCACCACGG TGGAGCACGACGCGGTGCGCGCGGCCGCACCCGAGCGGCCCGCGGACCTGCTCGCCGACACCCGTCGCGACGTGGTGTGG TGGGGCCTGATCGGTGCCGGTGGCCTCGTCGTCGCGCTGGTGCTGCGCCCCGTCCTCGCCCGGCGCAGAACCTAG
Upstream 100 bases:
>100_bases TCCCGGACACCTGGGTGAAGCTGTTCGGCGCCGGCGTACCGCTCTCGCAGAACCTCGCGCTCTGCCCGCCCGCCGCGGCC GGCGCCCAGGACGGCCCGTC
Downstream 100 bases:
>100_bases CTGCAGCTCACGACCTATCAGCCGGTAGTGCGCTACGCCCGGTAGGACAGCGTCGTCATCATCCCGCTCTCCGCGTGGTA GATGTTGTGGCAGTGCGCCG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRVTAAAVGTAVVVAVLGSAPAAPAAPAAAAAVPPSCADFQPEMPVEQYDGASEPLRLLGVEKAQHVLAGPGRPGAGVAV AVLDSGVRRGPGMDVVAGPNLAGLDELVDWHGTAVAGIIAGAPLPDGSPVGIAPGARIVDVRVYDSRDPQSDRGEQPVTP ASVAAGLDWVARFARDRGIGVANVSAAVPASPALAAAVRRAWRAGVVVVAATGNRPEEGGFLFPELGGEERRPGEDAAGE VFPAGYPHVVGVNATRTGEPSGSPVTDFVLPSSDTDVAAPTYGALSVAVNGATCVIPEVATSWSAAEVSGVLALLRSHYP RDRPAQAVARLLNTANGTTAAPTRLTGVGVVQPYQALTRPLEPRPDGAVELTTVEHDAVRAAAPERPADLLADTRRDVVW WGLIGAGGLVVALVLRPVLARRRT
Sequences:
>Translated_424_residues MRVTAAAVGTAVVVAVLGSAPAAPAAPAAAAAVPPSCADFQPEMPVEQYDGASEPLRLLGVEKAQHVLAGPGRPGAGVAV AVLDSGVRRGPGMDVVAGPNLAGLDELVDWHGTAVAGIIAGAPLPDGSPVGIAPGARIVDVRVYDSRDPQSDRGEQPVTP ASVAAGLDWVARFARDRGIGVANVSAAVPASPALAAAVRRAWRAGVVVVAATGNRPEEGGFLFPELGGEERRPGEDAAGE VFPAGYPHVVGVNATRTGEPSGSPVTDFVLPSSDTDVAAPTYGALSVAVNGATCVIPEVATSWSAAEVSGVLALLRSHYP RDRPAQAVARLLNTANGTTAAPTRLTGVGVVQPYQALTRPLEPRPDGAVELTTVEHDAVRAAAPERPADLLADTRRDVVW WGLIGAGGLVVALVLRPVLARRRT >Mature_424_residues MRVTAAAVGTAVVVAVLGSAPAAPAAPAAAAAVPPSCADFQPEMPVEQYDGASEPLRLLGVEKAQHVLAGPGRPGAGVAV AVLDSGVRRGPGMDVVAGPNLAGLDELVDWHGTAVAGIIAGAPLPDGSPVGIAPGARIVDVRVYDSRDPQSDRGEQPVTP ASVAAGLDWVARFARDRGIGVANVSAAVPASPALAAAVRRAWRAGVVVVAATGNRPEEGGFLFPELGGEERRPGEDAAGE VFPAGYPHVVGVNATRTGEPSGSPVTDFVLPSSDTDVAAPTYGALSVAVNGATCVIPEVATSWSAAEVSGVLALLRSHYP RDRPAQAVARLLNTANGTTAAPTRLTGVGVVQPYQALTRPLEPRPDGAVELTTVEHDAVRAAAPERPADLLADTRRDVVW WGLIGAGGLVVALVLRPVLARRRT
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 42995; Mature: 42995
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTAAAVGTAVVVAVLGSAPAAPAAPAAAAAVPPSCADFQPEMPVEQYDGASEPLRLLG CEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHH VEKAQHVLAGPGRPGAGVAVAVLDSGVRRGPGMDVVAGPNLAGLDELVDWHGTAVAGIIA HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHH GAPLPDGSPVGIAPGARIVDVRVYDSRDPQSDRGEQPVTPASVAAGLDWVARFARDRGIG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC VANVSAAVPASPALAAAVRRAWRAGVVVVAATGNRPEEGGFLFPELGGEERRPGEDAAGE EEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCC VFPAGYPHVVGVNATRTGEPSGSPVTDFVLPSSDTDVAAPTYGALSVAVNGATCVIPEVA CCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEECCHHH TSWSAAEVSGVLALLRSHYPRDRPAQAVARLLNTANGTTAAPTRLTGVGVVQPYQALTRP CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHCCC LEPRPDGAVELTTVEHDAVRAAAPERPADLLADTRRDVVWWGLIGAGGLVVALVLRPVLA CCCCCCCCEEEEEECHHHHHHCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH RRRT HCCC >Mature Secondary Structure MRVTAAAVGTAVVVAVLGSAPAAPAAPAAAAAVPPSCADFQPEMPVEQYDGASEPLRLLG CEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHH VEKAQHVLAGPGRPGAGVAVAVLDSGVRRGPGMDVVAGPNLAGLDELVDWHGTAVAGIIA HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHH GAPLPDGSPVGIAPGARIVDVRVYDSRDPQSDRGEQPVTPASVAAGLDWVARFARDRGIG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC VANVSAAVPASPALAAAVRRAWRAGVVVVAATGNRPEEGGFLFPELGGEERRPGEDAAGE EEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCC VFPAGYPHVVGVNATRTGEPSGSPVTDFVLPSSDTDVAAPTYGALSVAVNGATCVIPEVA CCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEECCHHH TSWSAAEVSGVLALLRSHYPRDRPAQAVARLLNTANGTTAAPTRLTGVGVVQPYQALTRP CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHCCC LEPRPDGAVELTTVEHDAVRAAAPERPADLLADTRRDVVWWGLIGAGGLVVALVLRPVLA CCCCCCCCEEEEEECHHHHHHCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH RRRT HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2059048; 1518788; 1447775; 9115441 [H]