| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is caiD [C]
Identifier: 119714555
GI number: 119714555
Start: 306940
End: 307707
Strand: Direct
Name: caiD [C]
Synonym: Noca_0288
Alternate gene names: 119714555
Gene position: 306940-307707 (Clockwise)
Preceding gene: 119714554
Following gene: 119714558
Centisome position: 6.16
GC content: 77.34
Gene sequence:
>768_bases GTGAGCGTCCGGGTCGAGGTCGACGGGCCGGTGACGACGGTCGTGCTCGACCGGCCCGAGACCCGCAACGCGGTCGACGG CCCCACGGCTGCGGCGCTGGCCGCGGCGTTCCGGGCCTTCGACGAGGACGACACGCAGAGCGTGGCGGTGCTGCACGGCG AGGGCGGCACCTTCTGCGCCGGCGCCGACCTCAAGTCGATCGGCACCGAGCGCGGCAACCAGGTCGCCGAGCCCATCGAC GCCGCCGACGGGCCGATGGGTCCGACGCGGATGCGGCTGAGCAAGCCGGTGATCGCGGCGATCGAGGGGTACGCCGTCGC GGGCGGGCTGGAGCTGGCGCTGTGGTGCGACCTGCGGGTCGCCGCGGACGACGCGGTCCTCGGGGTCTTCTGCCGGCGGT GGGGCGTGCCCCTCGTCGACGGCGGCACGGTGCGGCTGCCCCGGCTGATCGGCACCAGCCGGGCGCTGGACCTGATCCTC ACCGGTCGGGCTGTCGGCGCCGAGGAGGCCGAGCGGATCGGCCTGGTCAACCGGGTCGTCCCGGCCGGCCGGGCGCGCGC GGAGGCCGAGGCGCTGGCGCGCTCGCTCGCCGTCCTCCCCCAGGAGTGCCTGCGGCAGGACCGGCTGTCCGTGCTCGACC AGGAGGGCCGGACCGAGGCTGAGGCGCTCGCCGGCGAGCTGCGGCACGGGCTGGTCTCCCTGGCGGCCGACGCCCTCGGC GGGGCCGCCCGGTTCGCCGCCGGCGAGGGGCGTCACGGCCGCTTCTGA
Upstream 100 bases:
>100_bases GGGTCGAGCAGAACCCGCCGTACTACCGCGAGCTCGCGCAGCGGCACCTCGCCGGCGTCGCGGTGGTGGAGCCCGAGCCG GTCGTGCGGGAGGTCGAGTC
Downstream 100 bases:
>100_bases GTGACTCCCGGCGGGAGGTCCTCGAGGCACACCGCGACCAGCTCGGCAGCGCTGTCGCTGTCCTGGTGGACCTCCCAACC GCGGTCGAAGGACACGAGCA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSVRVEVDGPVTTVVLDRPETRNAVDGPTAAALAAAFRAFDEDDTQSVAVLHGEGGTFCAGADLKSIGTERGNQVAEPID AADGPMGPTRMRLSKPVIAAIEGYAVAGGLELALWCDLRVAADDAVLGVFCRRWGVPLVDGGTVRLPRLIGTSRALDLIL TGRAVGAEEAERIGLVNRVVPAGRARAEAEALARSLAVLPQECLRQDRLSVLDQEGRTEAEALAGELRHGLVSLAADALG GAARFAAGEGRHGRF
Sequences:
>Translated_255_residues MSVRVEVDGPVTTVVLDRPETRNAVDGPTAAALAAAFRAFDEDDTQSVAVLHGEGGTFCAGADLKSIGTERGNQVAEPID AADGPMGPTRMRLSKPVIAAIEGYAVAGGLELALWCDLRVAADDAVLGVFCRRWGVPLVDGGTVRLPRLIGTSRALDLIL TGRAVGAEEAERIGLVNRVVPAGRARAEAEALARSLAVLPQECLRQDRLSVLDQEGRTEAEALAGELRHGLVSLAADALG GAARFAAGEGRHGRF >Mature_254_residues SVRVEVDGPVTTVVLDRPETRNAVDGPTAAALAAAFRAFDEDDTQSVAVLHGEGGTFCAGADLKSIGTERGNQVAEPIDA ADGPMGPTRMRLSKPVIAAIEGYAVAGGLELALWCDLRVAADDAVLGVFCRRWGVPLVDGGTVRLPRLIGTSRALDLILT GRAVGAEEAERIGLVNRVVPAGRARAEAEALARSLAVLPQECLRQDRLSVLDQEGRTEAEALAGELRHGLVSLAADALGG AARFAAGEGRHGRF
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=190, Percent_Identity=32.1052631578947, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI20127408, Length=178, Percent_Identity=30.3370786516854, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI31542718, Length=202, Percent_Identity=30.1980198019802, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI68989263, Length=140, Percent_Identity=39.2857142857143, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI70995211, Length=182, Percent_Identity=32.4175824175824, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4502327, Length=197, Percent_Identity=33.502538071066, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI221142681, Length=200, Percent_Identity=37.5, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1787659, Length=194, Percent_Identity=36.0824742268041, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788682, Length=185, Percent_Identity=36.7567567567568, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790281, Length=189, Percent_Identity=32.2751322751323, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788597, Length=188, Percent_Identity=29.2553191489362, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787660, Length=198, Percent_Identity=33.8383838383838, Blast_Score=75, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560910, Length=243, Percent_Identity=49.3827160493827, Blast_Score=230, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17540714, Length=192, Percent_Identity=31.7708333333333, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25145438, Length=187, Percent_Identity=34.2245989304813, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17558304, Length=187, Percent_Identity=34.2245989304813, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17554946, Length=194, Percent_Identity=32.9896907216495, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25144276, Length=182, Percent_Identity=37.3626373626374, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17508951, Length=182, Percent_Identity=37.3626373626374, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17534483, Length=180, Percent_Identity=34.4444444444444, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17508953, Length=182, Percent_Identity=37.3626373626374, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17535521, Length=207, Percent_Identity=26.5700483091787, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17540306, Length=172, Percent_Identity=33.7209302325581, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI25141363, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357171, Length=247, Percent_Identity=47.3684210526316, Blast_Score=221, Evalue=5e-58, Organism=Drosophila melanogaster, GI24650670, Length=252, Percent_Identity=44.8412698412698, Blast_Score=194, Evalue=4e-50, Organism=Drosophila melanogaster, GI20129971, Length=258, Percent_Identity=34.8837209302326, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24653477, Length=258, Percent_Identity=34.8837209302326, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24653139, Length=194, Percent_Identity=34.020618556701, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI19921000, Length=193, Percent_Identity=34.7150259067358, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24583077, Length=193, Percent_Identity=34.7150259067358, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24583079, Length=193, Percent_Identity=34.7150259067358, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI19922422, Length=229, Percent_Identity=24.4541484716157, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 26549; Mature: 26418
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRVEVDGPVTTVVLDRPETRNAVDGPTAAALAAAFRAFDEDDTQSVAVLHGEGGTFCA CEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE GADLKSIGTERGNQVAEPIDAADGPMGPTRMRLSKPVIAAIEGYAVAGGLELALWCDLRV CCCHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHCCEEEECCCEEEEEEEEEE AADDAVLGVFCRRWGVPLVDGGTVRLPRLIGTSRALDLILTGRAVGAEEAERIGLVNRVV CCCHHHHHHHHHHCCCCEECCCCEEEHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHC PAGRARAEAEALARSLAVLPQECLRQDRLSVLDQEGRTEAEALAGELRHGLVSLAADALG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC GAARFAAGEGRHGRF CHHHHCCCCCCCCCC >Mature Secondary Structure SVRVEVDGPVTTVVLDRPETRNAVDGPTAAALAAAFRAFDEDDTQSVAVLHGEGGTFCA EEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE GADLKSIGTERGNQVAEPIDAADGPMGPTRMRLSKPVIAAIEGYAVAGGLELALWCDLRV CCCHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHCCEEEECCCEEEEEEEEEE AADDAVLGVFCRRWGVPLVDGGTVRLPRLIGTSRALDLILTGRAVGAEEAERIGLVNRVV CCCHHHHHHHHHHCCCCEECCCCEEEHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHC PAGRARAEAEALARSLAVLPQECLRQDRLSVLDQEGRTEAEALAGELRHGLVSLAADALG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC GAARFAAGEGRHGRF CHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA