| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714543
Identifier: 119714543
GI number: 119714543
Start: 298300
End: 298785
Strand: Direct
Name: 119714543
Synonym: Noca_0276
Alternate gene names: NA
Gene position: 298300-298785 (Clockwise)
Preceding gene: 119714540
Following gene: 119714544
Centisome position: 5.98
GC content: 72.02
Gene sequence:
>486_bases ATGGCCGACCAGGTCGACGGGATCGACTTCGCCCTCGCCGCCTACCGGGAGGGCGGCGCCTGGACCGTCCAGGAGCTCGC CCACGACGTCCTCGAGGACATCGACACCCTCTCCGCCGCGCTGCGCCGCTTCCCCGGGGACGGGGGAGCGGTCGGGATGG TCGCGATCGAGGAGGACTTCTTCGTCGTGGTCCGCGTCGCGGGGCCGACCACCCGGGTCCTGCTCTCCGACATCACCGCC GCCGACGAGTGGGAGCTGGCCAGCTCCGCCGTCGAGTTCCTCGGCCTGCCGCTGCCCGAGGACGAGGACGACCCGGTCCC CGCGGGCGACCTGGACCTGCTCGGCGACCTCGGCATGCACGCCATGGACATGGGCGTCCTGCTCGACGACATCGATCTCT ACCCCGACGAGATGCTCTCCGACGTCGCGCGGCGGCTGGGCTTCGGCAAGCTGTTCGACGACGCCGTCGGCCTCACCTCC GCGTGA
Upstream 100 bases:
>100_bases CCAGGCCGGTGACAGGCCGAAAGGGGGTTGGCCGCACCCGTCTGGTCTGACACCCTGGAGAGCGACGGACTGGACGCAAC GGTGCGGACGGAGGTAGGAC
Downstream 100 bases:
>100_bases CCACCGGCCACTGGGACGGCCCGATGCGGACCGCCCTCGACGAGGCACGCGCCGCCCTGGCGTCCGGAGACGTGCCGATC GGCGCGGTGGTGCTGGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MADQVDGIDFALAAYREGGAWTVQELAHDVLEDIDTLSAALRRFPGDGGAVGMVAIEEDFFVVVRVAGPTTRVLLSDITA ADEWELASSAVEFLGLPLPEDEDDPVPAGDLDLLGDLGMHAMDMGVLLDDIDLYPDEMLSDVARRLGFGKLFDDAVGLTS A
Sequences:
>Translated_161_residues MADQVDGIDFALAAYREGGAWTVQELAHDVLEDIDTLSAALRRFPGDGGAVGMVAIEEDFFVVVRVAGPTTRVLLSDITA ADEWELASSAVEFLGLPLPEDEDDPVPAGDLDLLGDLGMHAMDMGVLLDDIDLYPDEMLSDVARRLGFGKLFDDAVGLTS A >Mature_160_residues ADQVDGIDFALAAYREGGAWTVQELAHDVLEDIDTLSAALRRFPGDGGAVGMVAIEEDFFVVVRVAGPTTRVLLSDITAA DEWELASSAVEFLGLPLPEDEDDPVPAGDLDLLGDLGMHAMDMGVLLDDIDLYPDEMLSDVARRLGFGKLFDDAVGLTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17154; Mature: 17023
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQVDGIDFALAAYREGGAWTVQELAHDVLEDIDTLSAALRRFPGDGGAVGMVAIEEDF CCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCE FVVVRVAGPTTRVLLSDITAADEWELASSAVEFLGLPLPEDEDDPVPAGDLDLLGDLGMH EEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHH AMDMGVLLDDIDLYPDEMLSDVARRLGFGKLFDDAVGLTSA HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCC >Mature Secondary Structure ADQVDGIDFALAAYREGGAWTVQELAHDVLEDIDTLSAALRRFPGDGGAVGMVAIEEDF CCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCE FVVVRVAGPTTRVLLSDITAADEWELASSAVEFLGLPLPEDEDDPVPAGDLDLLGDLGMH EEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHH AMDMGVLLDDIDLYPDEMLSDVARRLGFGKLFDDAVGLTSA HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA