| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is treY [H]
Identifier: 119714535
GI number: 119714535
Start: 287511
End: 289760
Strand: Reverse
Name: treY [H]
Synonym: Noca_0268
Alternate gene names: 119714535
Gene position: 289760-287511 (Counterclockwise)
Preceding gene: 119714536
Following gene: 119714534
Centisome position: 5.81
GC content: 74.36
Gene sequence:
>2250_bases ATGCGCGCGCCGGTCAGCACCTACCGTCTGCAGATCACGCCCGAGTTCGACCTGTTCGAGGCGGCCCGCCGGTTGCCGTA CCTGCGCGCCCTGGGCGCCGACTGGGTCTACCTCTCGCCGCTGCTCGCCTCCGAGCCGGGCAGCAACCACGGGTACGACG TCGTCGCGTTCGACCGAGTCGACCCCGCGCGCGGCGGCGCCGAGGGGCTCGCCGTACTCTCCGCGGAGGCGCGCCGGCTC GGGATGGGGATCCTGGTCGACATCGTGCCCAACCACGTCGGCGTCGCCACCCCGGCCGAGAACGCGTGGTGGTGGGACCT GCTCCAGCACGGCCGCGCCTCGAAGCACGCCGACGCCTTCGACGTCGACTGGGACGCCGGGGACGGCAAGGTGCTGATCC CGGTGGTCGGCGACGGCGACGGGGGCTCGATCCGGGTCGAGGACGGAGAGGTCCGCTACCACGACCACCGGTTCCCGCTC GCGGCCGGCACGTCCGCGCACGAGGAGCAGCACTACCGCCTGGTGTCTTGGCGCGACGCCGACGACAAGCTGAACTACCG GCGGTTCTTCGCGGTCAACACGCTGGCGGGCGTACGCGTCGAGGAGCCGGAGGTCTTCGCGCAGTCCCACGTCGAGATCC GCCGGTGGTTCGCCGAGGGTCTCGTCGACGGCCTGCGGGTCGACCACCCGGACGGCCTGCGCGATCCCCAGGGCTACCTC GACGACCTGGCCGACCTCACCGGCCGCGCGTACGTGCTCGTCGAGAAGATCCTCGAGCCCGGCGAGAAGCTGCCGCGCTC GTGGGCGACCCAGGGCACCACCGGGTACGACGGGCTCGCGCTGGTCGACCGGGTGCTCACCGACCCCACGGGCCAGGCGC CGCTGGACCGGCTCGAGGCCCGCCTGCGTGGCGCGCCGGTCGACTGGCCCGACCTGATCCACGGCACCAAGCGCGCCGTC GCCGATGGGATCCTCCAGTCGGAGGTGCGCCGCATCGTCCGCGAGATCGGGCCGGAGGACCCCGCGCCGTACCGCGACGC GGTCGCCGAGCTGCTGACCTGCTTCCCCGTCTACCGGTCCTACCTGCCCGAGGGGCGCGACCATCTCGCCGAGGCGTTCG CCCGTGCGCGGCGCACCCGTCCCGACCTGGCCGCGACGTACGACGCCCTCGAGCCCGTGCTCACCGACGCCGCCAGCCCG CCCGCGCTGCGCTTCCAGCAGACCAGCGGCATGGTGATGGCCAAGGGCGTCGAGGACTGCGCGTTCTACCGCTGGTCGCG GCTCACGTCGCTGACCGAGGTCGGCGGGGACCCGTCGGTCTTCGCGGTCACGGTCGCGGGCTTCCACGAGGCGATGGCCG CGCGGCAGCGGGACTGGCCGCACACGATGAACACGCTGTCGACGCACGACACGAAGCGCGGCGAGGACGTCCGGGCCCGG ATCACGGCGCTCGCCGAGATGCCGGACACCTGGGCCGCTGCGCTGGAGCGGCTGCTCGCGCTCGCGCCGGTGCCCGACCC CGGCTTCGGGTCGCTGCTGTGGCAGGCCGTCCTCGGCGCCTGGACGCCCGAGCACCTGCCGGACCTGCGCGACCGGCTGC ACGGCTACGCGGAGAAGGCGATGCGCGAGGCCGGTGACCGCACGACGTGGACCGAGCCGGACGCGACGTACGAGGCGGCC GTGCACGCCGCCGTCGACGCCGCCTTCGACTCCACGGACGTGCGGGCGGTGCTCGCCGACCTCGCCGCGCGCATCGACGC GCCGGGGCGGTCGAACTCCCTCGCCGCCAAGCTCGTGGCGATCACCATGCCCGGGGTGCCCGACGTCTACCAGGGCAGCG AGCTGTTCGAGACCTCGCTGGTCGACCCCGACAACCGCCGCCCCGTCGACTTCGACCACCGAGCGGCGGTGCTGGCCGGG ACCGACGCCGACGACGCCGTCGACAAGCTGCACGTCACCTGCTCGGCACTCACGCTGCGCCGGGACCGGCCGGAGCTGTT CACGACGTACGCCGCCGTGCCGGCGACCGGGACTGCGGCGGACCACGTGCTGGCGTTCGACCGCGGCGGCGCGATCAGCG TCGCCACCCGCCTCCCGGTGGGCCTCGCGGCGCGCGGCGGGTGGGGTGACACCGTCCTGGAGCTGCCCGCCGGCCGCTGG CACGACGTGCTCACCGGGTCGTCCACCGAGGGCCGCCTCGCCGATCTGCTCGCCGCGCTGCCGGTGGCCATGCTGGTGCG GGCGGACTGA
Upstream 100 bases:
>100_bases TCGCGCAGCCTGATCGTGCTCCGCGAGCACCGCGAGCCGGAGGCCGAGGTCGACCACTCGGTGGCAGCGTCGGTCGCCCA GGCCCGCCGGGGCTGAGGCG
Downstream 100 bases:
>100_bases TCCGATGACCCACGGACCGTTCGACGTCTGGGCGCCGCTGCCCCGCCGGTTGCGCCTGGCCGTCGCCGGCGAGACCGTCG CGATGCGCCGCGGCGAGGGC
Product: maltooligosyl trehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW HDVLTGSSTEGRLADLLAALPVAMLVRAD
Sequences:
>Translated_749_residues MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW HDVLTGSSTEGRLADLLAALPVAMLVRAD >Mature_749_residues MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW HDVLTGSSTEGRLADLLAALPVAMLVRAD
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 81695; Mature: 81695
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRV CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEEECHHHHCCCCCCCCCEEEEECCC DPARGGAEGLAVLSAEARRLGMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAF CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC DVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPLAAGTSAHEEQHYRLVSWRDA CCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC DDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL CCCCCCEEEEEEEHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEA HHHHHHCCCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH RLRGAPVDWPDLIHGTKRAVADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASPPALRFQQTSGMVMAKGVEDC HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHH AFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKA HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH MREAGDRTTWTEPDATYEAAVHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVA HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEEEE ITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAGTDADDAVDKLHVTCSALTLR EECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC RDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW CCCCHHHHHHHCCCCCCCCHHHEEEECCCCCEEEHHHCCCCEECCCCCCCCEEECCCCCC HDVLTGSSTEGRLADLLAALPVAMLVRAD HHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRV CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEEECHHHHCCCCCCCCCEEEEECCC DPARGGAEGLAVLSAEARRLGMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAF CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC DVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPLAAGTSAHEEQHYRLVSWRDA CCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC DDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL CCCCCCEEEEEEEHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEA HHHHHHCCCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH RLRGAPVDWPDLIHGTKRAVADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASPPALRFQQTSGMVMAKGVEDC HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHH AFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKA HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH MREAGDRTTWTEPDATYEAAVHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVA HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEEEE ITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAGTDADDAVDKLHVTCSALTLR EECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC RDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW CCCCHHHHHHHCCCCCCCCHHHEEEECCCCCEEEHHHCCCCEECCCCCCCCEEECCCCCC HDVLTGSSTEGRLADLLAALPVAMLVRAD HHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]