| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714529
Identifier: 119714529
GI number: 119714529
Start: 281930
End: 282394
Strand: Reverse
Name: 119714529
Synonym: Noca_0262
Alternate gene names: NA
Gene position: 282394-281930 (Counterclockwise)
Preceding gene: 119714534
Following gene: 119714524
Centisome position: 5.66
GC content: 74.84
Gene sequence:
>465_bases GTGACCGGCAGGCTCAGCGCGAAGGTGCTCGTGGTGTCGCCGCTGTCGGTCGAGGTGAACGTGACGCCCGTGGAGCGGAC CAGCGTGTACGACGAGCCGGAACGCGTCAGCACCAGCACGGTGCCCGTGGTGGTCAGCAGGCCACCGCCCTCGATCGGGC CGTGCCGCACCTGGAGCCGGGTCAGCGTCCCGGTCTCGGGGACGACCGTCGCGGTCGGGCCCGCCACCTGGGTGGCGGCG CAGCTCGCCGTGTCGCACCCGAGGCTCGGCGTACCGGCCACGCTCCCGAGGGTGATCAGGGCCGCGCGGCCGGCCTGCGG CGCGCTCGCCTGCGCCGCCAACGACACCCCGACCAGGCCCGGGAAGGTCGCCACCAGCACCGCCGCGATCGTCACCCTCA GTATGGCCCGGACCATAGCCGGGAAGCCCGCCCGCCACCGCGGATCGGCCGCCGGTCTGGACTGA
Upstream 100 bases:
>100_bases ACGCCGCCATCCGGATCCGTCGGTGCCGGCAACGGCGAGGAACGCTGGGCGCGAGCAGGCGAAGGCACCGTCGACCTGCA GCGCGACGTGGTCCCCTGCC
Downstream 100 bases:
>100_bases CACTCCGCGCCCACCGATCGGTGTGGCGATCCCGGGACCGCCACACCGACCGCGTCAGCGCGAGACCTGCTGGGGGATGT CGGAGAGCTGCCGCACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTGRLSAKVLVVSPLSVEVNVTPVERTSVYDEPERVSTSTVPVVVSRPPPSIGPCRTWSRVSVPVSGTTVAVGPATWVAA QLAVSHPRLGVPATLPRVIRAARPACGALACAANDTPTRPGKVATSTAAIVTLSMARTIAGKPARHRGSAAGLD
Sequences:
>Translated_154_residues MTGRLSAKVLVVSPLSVEVNVTPVERTSVYDEPERVSTSTVPVVVSRPPPSIGPCRTWSRVSVPVSGTTVAVGPATWVAA QLAVSHPRLGVPATLPRVIRAARPACGALACAANDTPTRPGKVATSTAAIVTLSMARTIAGKPARHRGSAAGLD >Mature_153_residues TGRLSAKVLVVSPLSVEVNVTPVERTSVYDEPERVSTSTVPVVVSRPPPSIGPCRTWSRVSVPVSGTTVAVGPATWVAAQ LAVSHPRLGVPATLPRVIRAARPACGALACAANDTPTRPGKVATSTAAIVTLSMARTIAGKPARHRGSAAGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15748; Mature: 15617
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRLSAKVLVVSPLSVEVNVTPVERTSVYDEPERVSTSTVPVVVSRPPPSIGPCRTWSR CCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE VSVPVSGTTVAVGPATWVAAQLAVSHPRLGVPATLPRVIRAARPACGALACAANDTPTRP EEECCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC GKVATSTAAIVTLSMARTIAGKPARHRGSAAGLD CCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TGRLSAKVLVVSPLSVEVNVTPVERTSVYDEPERVSTSTVPVVVSRPPPSIGPCRTWSR CCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE VSVPVSGTTVAVGPATWVAAQLAVSHPRLGVPATLPRVIRAARPACGALACAANDTPTRP EEECCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC GKVATSTAAIVTLSMARTIAGKPARHRGSAAGLD CCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA