| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutM [H]
Identifier: 119714495
GI number: 119714495
Start: 244517
End: 245392
Strand: Direct
Name: cutM [H]
Synonym: Noca_0228
Alternate gene names: 119714495
Gene position: 244517-245392 (Clockwise)
Preceding gene: 119714494
Following gene: 119714496
Centisome position: 4.9
GC content: 74.89
Gene sequence:
>876_bases ATGTACCCGTCCCGGTTCCGCTACGAGGCGCCGCGCTCGATCGACGAGGCGATCCAGCTCCTCCACGAGGGCGCCGGCGA GGCCAAGGTCCTCGCCGGAGGCCAGAGCCTGGTCCCGCTGATGAAGCTGCGGTTCGCCGCGCCCGAGCTCCTCGTCGACA TCAACAACCTGCCCGGCCTCGACCACCTGGACGTCGCGGCCGACGGCGGCATCCGGGTCGGCGCGCTGTGCCGCCACCGT GACCTGGAGCGCTCGCTCGAGGTCGCGCGGGCGCAGCCGGTGATGGCCGCGGCCGCCCCGCTGATCGCCGACCCGATCGT CCGCACCCGCGGCACCCTGGTCGGCTCGCTGTGCCACGCGGATCCCCAGGGGGACTGGGCCGCCGTCGTCACGGCGCTCG GCGGCCACGTCGTCGCCCAGGGCCCGGGCGGCCGGCGGAGCATCCCGATCACCGACTTCGTGACCGGGCCGTTCCAGAAC GTCCTCGAGTACGACGAGGTCGCGGTCGAGGCGGTCCTCCCGGCGCCACGTGCCCGGGTGGCCGGCGGCTTCCTCAAGCT CGAGCGCCGGGTCGGCGACTTCGCCACGGCGGGCACCGCGGTCGCGCTCGAGCTCGATGGCGACCGGGTCACCCGTGCCG GCATCGCCCTCACGGGCGTCGGCAGCCGCACCGTCGACGCCCGAGCGGCCGCGGAGGCGCTCGTCGGCCAGCCGCTCACG GCCGAGGCGATCGGCCGTGCGGCCGACCTCGCGGCCGAGGTGGCGCAGCCGACCTCCGACCACCGTGGCAGCGCGTCGTA CAAGCGGCACGTGATCCACACCTTCGTCACCCGGATCCTGACCCGGGTCACCCAGACCAGCGAGGCTGCAGCATGA
Upstream 100 bases:
>100_bases CGCACCAGCACCCGCGCCCGGATCCCACGGACGTCGAGTCGCTGCCGGTCGCGATCCCGGACCCGGCGGCGGAGCCGCGA CACCGGACCGAAGGAGCCTG
Downstream 100 bases:
>100_bases CGAGCTTGTTCGAAGAAGTTCCCGCGGCCGCGGCCGAAGGCGTCCCGGTCCGTCGGATCACCGTCCGCGTCAACGGCACG CCGAGGACCGCCGACGTCGA
Product: molybdopterin dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MYPSRFRYEAPRSIDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNLPGLDHLDVAADGGIRVGALCRHR DLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHADPQGDWAAVVTALGGHVVAQGPGGRRSIPITDFVTGPFQN VLEYDEVAVEAVLPAPRARVAGGFLKLERRVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLT AEAIGRAADLAAEVAQPTSDHRGSASYKRHVIHTFVTRILTRVTQTSEAAA
Sequences:
>Translated_291_residues MYPSRFRYEAPRSIDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNLPGLDHLDVAADGGIRVGALCRHR DLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHADPQGDWAAVVTALGGHVVAQGPGGRRSIPITDFVTGPFQN VLEYDEVAVEAVLPAPRARVAGGFLKLERRVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLT AEAIGRAADLAAEVAQPTSDHRGSASYKRHVIHTFVTRILTRVTQTSEAAA >Mature_291_residues MYPSRFRYEAPRSIDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNLPGLDHLDVAADGGIRVGALCRHR DLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHADPQGDWAAVVTALGGHVVAQGPGGRRSIPITDFVTGPFQN VLEYDEVAVEAVLPAPRARVAGGFLKLERRVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLT AEAIGRAADLAAEVAQPTSDHRGSASYKRHVIHTFVTRILTRVTQTSEAAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=276, Percent_Identity=26.0869565217391, Blast_Score=95, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 30501; Mature: 30501
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPSRFRYEAPRSIDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNLPGL CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHEEECCCCCCC DHLDVAADGGIRVGALCRHRDLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPQGDWAAVVTALGGHVVAQGPGGRRSIPITDFVTGPFQNVLEYDEVAVEAVLPAPRARV CCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH AGGFLKLERRVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLT HHHHHHHHHHHCCHHCCCEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHCCCCC AEAIGRAADLAAEVAQPTSDHRGSASYKRHVIHTFVTRILTRVTQTSEAAA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYPSRFRYEAPRSIDEAIQLLHEGAGEAKVLAGGQSLVPLMKLRFAAPELLVDINNLPGL CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHEEECCCCCCC DHLDVAADGGIRVGALCRHRDLERSLEVARAQPVMAAAAPLIADPIVRTRGTLVGSLCHA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPQGDWAAVVTALGGHVVAQGPGGRRSIPITDFVTGPFQNVLEYDEVAVEAVLPAPRARV CCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH AGGFLKLERRVGDFATAGTAVALELDGDRVTRAGIALTGVGSRTVDARAAAEALVGQPLT HHHHHHHHHHHCCHHCCCEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHCCCCC AEAIGRAADLAAEVAQPTSDHRGSASYKRHVIHTFVTRILTRVTQTSEAAA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]