| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714417
Identifier: 119714417
GI number: 119714417
Start: 166369
End: 167466
Strand: Direct
Name: 119714417
Synonym: Noca_0150
Alternate gene names: NA
Gene position: 166369-167466 (Clockwise)
Preceding gene: 119714416
Following gene: 119714418
Centisome position: 3.34
GC content: 74.68
Gene sequence:
>1098_bases ATGAGTCGGAAGGTCTACCTGCACATCGGTGCGCCGAAGACGGGGACCACCTACCTGCAGGACCGGCTCACGGTGAACGC CAAGACGCTGGCCGCGCAGGGGGTGCACTTCCCGACCGGTTCGCCGCTGGTCAGCCCCGGGCTGTACCAGTTCCGCGCGG CGCTCGACCTGCTCGGCCAGGACTGGGGCGGGCCACCGGGACACGCCGACGGCAGCTGGGAGGGCCTGGTCCGGCGGGCC CGGCGCCGCTCCGGGACCGTCGTGATCAGCCACGAGATCCTCGCGCCCGCGGCGCCGGGCCAGGTGGCCCGCGCGATGCG CGACCTGGCCGGCAGCGAGATCCACGTCGTCTACACCGCGCGGGACCTGGCCCGGCAGCTGCCGGCCGCGTGGCAGGAGA GCATCAAGCAGGGCCGGCGCTGGAGCTACCGGCGCTTCCTCGACCGCTTCGAGAAAGGCCGTAGCTGGTTCTACCGGGCC TTCGACGTCCCGCGGGTCCTCGGCACCTGGGGCGCCGGGCTGCCCCCCGAGCGCGTGCACGTCGTCACCGTCCCGCACGC CCGGGTGCAGACCCAGCACGGCGACCAGTTGTGGCTGCGCATGTGCGAGGTGCTCGGCATCGACCCGGTGTGGGCGCCGC TCGACAGCGACCGCTCCAACCGCTCGCTGGGCATCGCGGAGACCCAGGTGATCCGCCAGCTCAACCGCCGGATGGACCGG GCCGCTCGCCGGGAGTCGACGTACGACGCGCTGATCCGCGACATGCTCGCCCAGGGTGAGCTGGTCAAGCGGGAGTCGGC CGCGGTCCGCCTGCCCCCGGAGCGCTTCGCGTGGGTCGAGGAGCGGGCCGAGCGGTGGATCGAGTGGATCGAGGGCAGCG GGGTGCACGTCGTCGGTGACGTCGCCGAGCTGCGCCCGGTGCGCCCGGCGGAGGACGAGCGCTGGCGCGACCCCGACCGG GTGCGCGCCAAACGCCAGCTCGCGACCGCGCTCGACGCCCTGGCCGCGATGACGCGGGAGGCGGCCCGCCGCCCGGACCC CGAGCGCCAGCTGACCACGCGGGTGCTGGCGCAGGCCCAACGGCTGCGCGACCGGTGA
Upstream 100 bases:
>100_bases GTTGCAACCGGGTCGGAGGAGCGGGTAACACGGCGTTACATGGAGGCGGGCCGGAGCCCCAGCCGCGCAGGCCCCGCTCG GCCTGCGGCACAATCGCAGC
Downstream 100 bases:
>100_bases GGGATCGGTGAGCCTGGGCGTCGACACGGACACCCCCGGGGTGCGGCGCGCCTGGGGCTGGGCCGCCCACCTCCAGGAGG GCGGTACGACGCCCTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSRKVYLHIGAPKTGTTYLQDRLTVNAKTLAAQGVHFPTGSPLVSPGLYQFRAALDLLGQDWGGPPGHADGSWEGLVRRA RRRSGTVVISHEILAPAAPGQVARAMRDLAGSEIHVVYTARDLARQLPAAWQESIKQGRRWSYRRFLDRFEKGRSWFYRA FDVPRVLGTWGAGLPPERVHVVTVPHARVQTQHGDQLWLRMCEVLGIDPVWAPLDSDRSNRSLGIAETQVIRQLNRRMDR AARRESTYDALIRDMLAQGELVKRESAAVRLPPERFAWVEERAERWIEWIEGSGVHVVGDVAELRPVRPAEDERWRDPDR VRAKRQLATALDALAAMTREAARRPDPERQLTTRVLAQAQRLRDR
Sequences:
>Translated_365_residues MSRKVYLHIGAPKTGTTYLQDRLTVNAKTLAAQGVHFPTGSPLVSPGLYQFRAALDLLGQDWGGPPGHADGSWEGLVRRA RRRSGTVVISHEILAPAAPGQVARAMRDLAGSEIHVVYTARDLARQLPAAWQESIKQGRRWSYRRFLDRFEKGRSWFYRA FDVPRVLGTWGAGLPPERVHVVTVPHARVQTQHGDQLWLRMCEVLGIDPVWAPLDSDRSNRSLGIAETQVIRQLNRRMDR AARRESTYDALIRDMLAQGELVKRESAAVRLPPERFAWVEERAERWIEWIEGSGVHVVGDVAELRPVRPAEDERWRDPDR VRAKRQLATALDALAAMTREAARRPDPERQLTTRVLAQAQRLRDR >Mature_364_residues SRKVYLHIGAPKTGTTYLQDRLTVNAKTLAAQGVHFPTGSPLVSPGLYQFRAALDLLGQDWGGPPGHADGSWEGLVRRAR RRSGTVVISHEILAPAAPGQVARAMRDLAGSEIHVVYTARDLARQLPAAWQESIKQGRRWSYRRFLDRFEKGRSWFYRAF DVPRVLGTWGAGLPPERVHVVTVPHARVQTQHGDQLWLRMCEVLGIDPVWAPLDSDRSNRSLGIAETQVIRQLNRRMDRA ARRESTYDALIRDMLAQGELVKRESAAVRLPPERFAWVEERAERWIEWIEGSGVHVVGDVAELRPVRPAEDERWRDPDRV RAKRQLATALDALAAMTREAARRPDPERQLTTRVLAQAQRLRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41445; Mature: 41314
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKVYLHIGAPKTGTTYLQDRLTVNAKTLAAQGVHFPTGSPLVSPGLYQFRAALDLLGQ CCCEEEEEECCCCCCCHHHHHHHEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH DWGGPPGHADGSWEGLVRRARRRSGTVVISHEILAPAAPGQVARAMRDLAGSEIHVVYTA CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCEEEEEEH RDLARQLPAAWQESIKQGRRWSYRRFLDRFEKGRSWFYRAFDVPRVLGTWGAGLPPERVH HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEE VVTVPHARVQTQHGDQLWLRMCEVLGIDPVWAPLDSDRSNRSLGIAETQVIRQLNRRMDR EEECCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AARRESTYDALIRDMLAQGELVKRESAAVRLPPERFAWVEERAERWIEWIEGSGVHVVGD HHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEC VAELRPVRPAEDERWRDPDRVRAKRQLATALDALAAMTREAARRPDPERQLTTRVLAQAQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLRDR HHHCC >Mature Secondary Structure SRKVYLHIGAPKTGTTYLQDRLTVNAKTLAAQGVHFPTGSPLVSPGLYQFRAALDLLGQ CCEEEEEECCCCCCCHHHHHHHEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH DWGGPPGHADGSWEGLVRRARRRSGTVVISHEILAPAAPGQVARAMRDLAGSEIHVVYTA CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCCEEEEEEH RDLARQLPAAWQESIKQGRRWSYRRFLDRFEKGRSWFYRAFDVPRVLGTWGAGLPPERVH HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEE VVTVPHARVQTQHGDQLWLRMCEVLGIDPVWAPLDSDRSNRSLGIAETQVIRQLNRRMDR EEECCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AARRESTYDALIRDMLAQGELVKRESAAVRLPPERFAWVEERAERWIEWIEGSGVHVVGD HHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEC VAELRPVRPAEDERWRDPDRVRAKRQLATALDALAAMTREAARRPDPERQLTTRVLAQAQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLRDR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA