Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714413

Identifier: 119714413

GI number: 119714413

Start: 160034

End: 161599

Strand: Direct

Name: 119714413

Synonym: Noca_0146

Alternate gene names: NA

Gene position: 160034-161599 (Clockwise)

Preceding gene: 119714412

Following gene: 119714414

Centisome position: 3.21

GC content: 72.54

Gene sequence:

>1566_bases
ATGCAGTTCACCACCTCTCGGGCGATCGTGCGTCGCCTCGTCCCGGCGGCCGCCGGTGCCGCCGTCCTCGCCACCGTGGC
CTCGTCCGCGGCCCTCGCCGCTCCGGGGGTGACCCCGGCGCACTACACCGACGCCCTGGACCCGGGCAGCACGGTGACGA
TCACCAAGACCGTCGAGACCCCACCGATCCCGCCGCGTCCCGACATCGTGTTCCTGGCCGACACGACCGGCAGCATGGGC
GGCAGCATCGCCAACGTCCGCAGCAACGCGAACGCGATCCTGGCCCAGATCCAGGCCGCACAGCCCACGGCCCGGTTCGC
GGTCGCGGAGTACAAGGACGAGTCCGACGGGCCCGCCGCGGTCTTCCACGTCGACCAGCAGCTCACCGACAGCACCGCGG
ACGTGGTCGCCGGTATCAACGCCTGGTCCGCCTCCGGCGGCGGCGACGCCCCCGAGGCGTGGATCGGCGCGCTCGGCCGG
ATCCCGTCGAGCATCGACTTCCGTCCCGACGGCACCCGGGTGCTGGTGATGTTCGGCGACGCGCCCAGCCACGACCCGTC
ACTGGGCTTCACCCTCGGGTCCGCGACCAGCGGCCTGCAGGCCAGCGGTGTCCGGGTGATCGCCATCGACGTGCCCGGCA
CCGCCGGCGGCCTCGATGCGCTCGGCCAGGCCACCCACGTGACCTCGCAGACCGGCGGCTCGCTCGCCGCGGCCGACCCC
GACCAGGTCGCGAGCACGATCCTCAGCGAGCTGCAGAACCTGCCCGCCGTGGTCACCCACGACACCACCTGTGACCCCGG
GGCGTCGCTGTCCTTCGACCAGGCCAGCCGCACGGTGACCTCCGGTGACAGCACGACGTTCGACGAGACCATCACCGTCG
CCGGTGACGCCGTGCAGGGCAGCGTGCTCACCTGCACCACGCGGTTCCTCGTCAACGGCGAGCTCCCGGGACCCGAGTTC
GTCCAGACCGTGGAGATCGCGGTCAACGACGTCACCCCGCCGGTCGTGACCGTCGAGAGCAAGACCGTCGAGGCCACCGG
GCCCGACGGTGCGACGGTCGGCTACACGTCCTCGGCGACCGACAACGTCGACGGGCCGCTCACCCCGACCTGCACGCCGG
CCTCGGGCAGCCTGTTCGGGCTCGGCGCGACGACCGTGACCTGCGCGGCCACGGACGCGGCCGGCAACACCGGCACCGGC
ACCGGCACGATCACCGTCGTCGACACCACGCCCCCGTCGGTCGGGTGCCCGGAGGCGGAGAACCCGGGCGGTCAGGTTCC
GGGCGCGCACAACGAGGACGGCTTCTTCCGGCTCGAGGCGAGCGACATCGTCGACGGCGACGTGGACGTCTACCTGCGCG
ACACCGGCAGCGGGACCGTCTTCGGGCCGTACGCGTCGGGCCAGCGGGTCAAGTACACCGAGAACGGCGCCAAGCCCTCG
GTGAAGACGATGCCGAGCGGCATCCTGCACATCACCGGCACCGGTGACGCCGAGGTGTACGCCGTCGACTTCAGCGGCAA
CACGTCCGCACCGGCGGCCTGCCTCGTCCCGCAGCCGCCCAAGTAG

Upstream 100 bases:

>100_bases
GTGGTGCGGGGTGGCCCGCTCGGGTCATGCCGCCCGGACGGCGAGCGTCCCTAGCGTCGAGAACCGCGGCACAAGCCGCC
TTCTCGGAGGGACATCCATC

Downstream 100 bases:

>100_bases
TCCGGACGGGCGACCGGAGCAGCTGCCGGAGTCTCGGGGGCGTCCGCCCCGGGGGTGATCCCCCGGGGCGGACGCCGATG
CCCGGCGCCGATCGCTCCCG

Product: hyalin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG
GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR
IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP
DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF
VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG
TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS
VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK

Sequences:

>Translated_521_residues
MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG
GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR
IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP
DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF
VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG
TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS
VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK
>Mature_521_residues
MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG
GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR
IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP
DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF
VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG
TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS
VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52243; Mature: 52243

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVET
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
PPIPPRPDIVFLADTTGSMGGSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAA
CCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE
VFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGRIPSSIDFRPDGTRVLVMFGD
EEEECHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
APSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP
CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEECCCCCCEECCCH
DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQG
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCC
SVLTCTTRFLVNGELPGPEFVQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSAT
CEEEEEEEEEEECCCCCHHHEEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCC
DNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTGTGTITVVDTTPPSVGCPEAE
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC
NPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS
CCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCC
VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK
CCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCC
>Mature Secondary Structure
MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVET
CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
PPIPPRPDIVFLADTTGSMGGSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAA
CCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE
VFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGRIPSSIDFRPDGTRVLVMFGD
EEEECHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
APSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP
CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEECCCCCCEECCCH
DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQG
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCC
SVLTCTTRFLVNGELPGPEFVQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSAT
CEEEEEEEEEEECCCCCHHHEEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCC
DNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTGTGTITVVDTTPPSVGCPEAE
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC
NPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS
CCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCC
VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK
CCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA