| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is btuE [H]
Identifier: 119714404
GI number: 119714404
Start: 151665
End: 152153
Strand: Reverse
Name: btuE [H]
Synonym: Noca_0137
Alternate gene names: 119714404
Gene position: 152153-151665 (Counterclockwise)
Preceding gene: 119714407
Following gene: 119714403
Centisome position: 3.05
GC content: 71.17
Gene sequence:
>489_bases ATGAGCATCCTCGACGCCAAGATCGCCCGCCTGGACGGGACCCCGAGCACGCTGGGCGAGATCACCGGCGGCCGGCCCGC GCTGTTGGTCAACGTCGCCAGCAAGTGCGGGCTGACCCCGCAGTACGCCGGGCTCGAGGAGCTCCACGAGCGGCTCGCGG ACCGCGGCTTCACGGTGGTCGGGCTGCCGTGCAACCAGTTCCGCGGGCAGGAGCCGGGGACCGCGGACGAGATCGCCGAG TTCTGCTCCGCGACGTACGGCGTCACCTTCCCGATGACCGAGAAGATCGACGTCAACGGCCCGGACCGCCACGAGATCTA CCGGACCCTCGTCGACACCCCGAACGAGTCCGGCGAGAGCGGCGACATCACGTGGAACTTCGAGAAGTTCCTCGTCGACG CCTCCGGCGCGGTCCTCGCCCGGTTCAGCCCCGGCGTCGAGCCCGGCGACCCCCGCCTGGTCGCCGCCGTCGAGTCCCAG GTCGGCTGA
Upstream 100 bases:
>100_bases CACGGAACGTCGCCGGGCCGGTGACCGGGACGAAGCTCACGCCCCGACGCTAGCCGGACGGTCCGACGGTTCCCTCCCGG CCGCGACGTAGCCTGGCCGC
Downstream 100 bases:
>100_bases CTCCCCTGTCCTCACTCGGTGACCCAGCCCACAGGCCGGAGAGCCGAAAGTAGGGTGCTGAGCCCAGGTAGGCTCACCTA GCCTCTTCCGGTGACCGAGA
Product: glutathione peroxidase
Products: glutathione disulfide; H2O
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSILDAKIARLDGTPSTLGEITGGRPALLVNVASKCGLTPQYAGLEELHERLADRGFTVVGLPCNQFRGQEPGTADEIAE FCSATYGVTFPMTEKIDVNGPDRHEIYRTLVDTPNESGESGDITWNFEKFLVDASGAVLARFSPGVEPGDPRLVAAVESQ VG
Sequences:
>Translated_162_residues MSILDAKIARLDGTPSTLGEITGGRPALLVNVASKCGLTPQYAGLEELHERLADRGFTVVGLPCNQFRGQEPGTADEIAE FCSATYGVTFPMTEKIDVNGPDRHEIYRTLVDTPNESGESGDITWNFEKFLVDASGAVLARFSPGVEPGDPRLVAAVESQ VG >Mature_161_residues SILDAKIARLDGTPSTLGEITGGRPALLVNVASKCGLTPQYAGLEELHERLADRGFTVVGLPCNQFRGQEPGTADEIAEF CSATYGVTFPMTEKIDVNGPDRHEIYRTLVDTPNESGESGDITWNFEKFLVDASGAVLARFSPGVEPGDPRLVAAVESQV G
Specific function: Not essential for B12 transport; however, it is an auxiliary component of the transport system [H]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=140, Percent_Identity=42.1428571428571, Blast_Score=105, Evalue=2e-23, Organism=Homo sapiens, GI90903240, Length=140, Percent_Identity=42.1428571428571, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI15618997, Length=162, Percent_Identity=38.8888888888889, Blast_Score=100, Evalue=7e-22, Organism=Homo sapiens, GI192455698, Length=126, Percent_Identity=39.6825396825397, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI90903238, Length=106, Percent_Identity=44.3396226415094, Blast_Score=87, Evalue=8e-18, Organism=Homo sapiens, GI4557629, Length=139, Percent_Identity=38.8489208633094, Blast_Score=84, Evalue=5e-17, Organism=Homo sapiens, GI6006001, Length=160, Percent_Identity=34.375, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI33186887, Length=155, Percent_Identity=35.4838709677419, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI41406084, Length=155, Percent_Identity=33.5483870967742, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1788003, Length=176, Percent_Identity=46.5909090909091, Blast_Score=155, Evalue=9e-40, Organism=Caenorhabditis elegans, GI71993584, Length=150, Percent_Identity=38, Blast_Score=102, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17506887, Length=152, Percent_Identity=36.1842105263158, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17535473, Length=142, Percent_Identity=39.4366197183099, Blast_Score=96, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17550320, Length=170, Percent_Identity=35.8823529411765, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193209493, Length=164, Percent_Identity=34.1463414634146, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193210707, Length=151, Percent_Identity=33.7748344370861, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319721, Length=127, Percent_Identity=52.755905511811, Blast_Score=147, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6322228, Length=146, Percent_Identity=50.6849315068493, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322826, Length=139, Percent_Identity=43.1654676258993, Blast_Score=117, Evalue=1e-27, Organism=Drosophila melanogaster, GI24656767, Length=156, Percent_Identity=37.1794871794872, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656777, Length=156, Percent_Identity=37.1794871794872, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656772, Length=138, Percent_Identity=39.1304347826087, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI85726443, Length=138, Percent_Identity=37.6811594202899, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: 1.11.1.9
Molecular weight: Translated: 17283; Mature: 17151
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILDAKIARLDGTPSTLGEITGGRPALLVNVASKCGLTPQYAGLEELHERLADRGFTVV CCCCCCHHHHCCCCCHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCEEE GLPCNQFRGQEPGTADEIAEFCSATYGVTFPMTEKIDVNGPDRHEIYRTLVDTPNESGES ECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC GDITWNFEKFLVDASGAVLARFSPGVEPGDPRLVAAVESQVG CCEEEEHHHEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC >Mature Secondary Structure SILDAKIARLDGTPSTLGEITGGRPALLVNVASKCGLTPQYAGLEELHERLADRGFTVV CCCCCHHHHCCCCCHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCEEE GLPCNQFRGQEPGTADEIAEFCSATYGVTFPMTEKIDVNGPDRHEIYRTLVDTPNESGES ECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC GDITWNFEKFLVDASGAVLARFSPGVEPGDPRLVAAVESQVG CCEEEEHHHEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: glutathione; H2O2
Specific reaction: 2 glutathione + H2O2 = glutathione disulfide + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3528129; 9097039; 9278503 [H]