| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714369
Identifier: 119714369
GI number: 119714369
Start: 115531
End: 116544
Strand: Direct
Name: 119714369
Synonym: Noca_0102
Alternate gene names: NA
Gene position: 115531-116544 (Clockwise)
Preceding gene: 119714368
Following gene: 119714370
Centisome position: 2.32
GC content: 74.16
Gene sequence:
>1014_bases ATGGTGGTGCCGACGCTGCCGGTGGCGGACTGCCACAACGACCTGCTGCTGGGTGTCCTGCACCAGCGCGAGCGGGGCAT CGCCGACCCGTTCGGCGACTTCTGGCTGCCGCAGCTGCGGGCCGGCGGCGTGGCCCTCCAGGTGCTCCCGGTCTTCACCG AGGAGCAGCACGTGGGCGAGGGCGCGCTGCGCCGGAGCCTGCAGGTGCTGGAGGAGGCCCGCCGCCTGGCCGACGTGCAC GTGGCCGACGTGGCGATCTGCGAGCGGGGCGACCAGATCCGGCCCACCATCGAGAGCGGCCGCATCGCGCTCGTCCTCGC ACTGGAGGGCTGTGAGCCGGTCGGCCACTCCCTCGAGCTGCTCGACACCTTCCACCGCCTCGGCGTCCGGATCGCCTCGA TGACCTGGAACCGCCGCACGATGATGGCCGACGGGGTCGGCGAGCAGGATGCCGGCGGCCGCCTGACGACCCTCGGCCTC GAGGCGGTCGCCGAGATGGAGCGGCTCGGCATGCTCGTCGACGTCAGCCACCTCTCGGAGACCGGCTTCTGGCACCTGGC CTCGGTCGCGACCAGGCCCTTCGTCGCGAGCCACTCCTCCTGCCGGGCCCTGCAGCCGCACCCGCGCAACCTCACCGACG AGCAGATCCGGGCGGTGGCCGACAGCGGGGGCTTCGTCGCCATCAACGGGTTCGGCCCGTTCCTGTCCGACGCCCCCACG GTGGACTCGTTCCTCGACCACGTCCAGCACGCGGTCGCGCTGGTGGGTCCCGAGCGCGTCGCGCTCGGCCTGGACTTCAT GCGCGACCTCGTGGACGCGGTCGACCCCGTGCTCTCCGGTGCGCTCGTCCACCCCGACACCCCGCCCTGGGTCGCCGGCC TCGAGCGGCCCGCCGACCTCGCCGCGCTCGCGGCGCGGCTGGAGGAGACGCTGGGGCCGCGAGCCGGCCGCCAGGTGGCT GCCGACACCGTCATCGACACCCTGACGCGGCAGCTGGCTCCGGCGCCGCGCTGA
Upstream 100 bases:
>100_bases TCGTGCAGCAGCTCTTCTACGGCGGCGCGCTGGTCATCGCCGTCTCCCTGGCGCAGCTGGCCCGCCGCCGCGAGGCGAGC AGCGCGGGCACCACCTCCTG
Downstream 100 bases:
>100_bases TCGCGGGTTGCTCGCGGGCACGATCCGCTGGTGGAACCGGGCCGCGCACCCAGCCGGATGAACTGGGTTCGGCTTTCGGG GACGTCCTCCTGTCGCGAAC
Product: thermostable dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVVPTLPVADCHNDLLLGVLHQRERGIADPFGDFWLPQLRAGGVALQVLPVFTEEQHVGEGALRRSLQVLEEARRLADVH VADVAICERGDQIRPTIESGRIALVLALEGCEPVGHSLELLDTFHRLGVRIASMTWNRRTMMADGVGEQDAGGRLTTLGL EAVAEMERLGMLVDVSHLSETGFWHLASVATRPFVASHSSCRALQPHPRNLTDEQIRAVADSGGFVAINGFGPFLSDAPT VDSFLDHVQHAVALVGPERVALGLDFMRDLVDAVDPVLSGALVHPDTPPWVAGLERPADLAALAARLEETLGPRAGRQVA ADTVIDTLTRQLAPAPR
Sequences:
>Translated_337_residues MVVPTLPVADCHNDLLLGVLHQRERGIADPFGDFWLPQLRAGGVALQVLPVFTEEQHVGEGALRRSLQVLEEARRLADVH VADVAICERGDQIRPTIESGRIALVLALEGCEPVGHSLELLDTFHRLGVRIASMTWNRRTMMADGVGEQDAGGRLTTLGL EAVAEMERLGMLVDVSHLSETGFWHLASVATRPFVASHSSCRALQPHPRNLTDEQIRAVADSGGFVAINGFGPFLSDAPT VDSFLDHVQHAVALVGPERVALGLDFMRDLVDAVDPVLSGALVHPDTPPWVAGLERPADLAALAARLEETLGPRAGRQVA ADTVIDTLTRQLAPAPR >Mature_337_residues MVVPTLPVADCHNDLLLGVLHQRERGIADPFGDFWLPQLRAGGVALQVLPVFTEEQHVGEGALRRSLQVLEEARRLADVH VADVAICERGDQIRPTIESGRIALVLALEGCEPVGHSLELLDTFHRLGVRIASMTWNRRTMMADGVGEQDAGGRLTTLGL EAVAEMERLGMLVDVSHLSETGFWHLASVATRPFVASHSSCRALQPHPRNLTDEQIRAVADSGGFVAINGFGPFLSDAPT VDSFLDHVQHAVALVGPERVALGLDFMRDLVDAVDPVLSGALVHPDTPPWVAGLERPADLAALAARLEETLGPRAGRQVA ADTVIDTLTRQLAPAPR
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=274, Percent_Identity=28.1021897810219, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI189458885, Length=276, Percent_Identity=26.0869565217391, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4758190, Length=276, Percent_Identity=26.0869565217391, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI193211608, Length=277, Percent_Identity=25.9927797833935, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI193211610, Length=276, Percent_Identity=25.3623188405797, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI221475880, Length=287, Percent_Identity=28.9198606271777, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI281362638, Length=294, Percent_Identity=26.8707482993197, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281362636, Length=294, Percent_Identity=26.8707482993197, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI161083233, Length=237, Percent_Identity=27.8481012658228, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 36279; Mature: 36279
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVPTLPVADCHNDLLLGVLHQRERGIADPFGDFWLPQLRAGGVALQVLPVFTEEQHVGE CCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCEEEEEEEECCCHHHCCH GALRRSLQVLEEARRLADVHVADVAICERGDQIRPTIESGRIALVLALEGCEPVGHSLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH LDTFHRLGVRIASMTWNRRTMMADGVGEQDAGGRLTTLGLEAVAEMERLGMLVDVSHLSE HHHHHHHHHEEEEEECCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCHHEEHHHHCC TGFWHLASVATRPFVASHSSCRALQPHPRNLTDEQIRAVADSGGFVAINGFGPFLSDAPT CCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCC VDSFLDHVQHAVALVGPERVALGLDFMRDLVDAVDPVLSGALVHPDTPPWVAGLERPADL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHCCCCCHHH AALAARLEETLGPRAGRQVAADTVIDTLTRQLAPAPR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVVPTLPVADCHNDLLLGVLHQRERGIADPFGDFWLPQLRAGGVALQVLPVFTEEQHVGE CCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCEEEEEEEECCCHHHCCH GALRRSLQVLEEARRLADVHVADVAICERGDQIRPTIESGRIALVLALEGCEPVGHSLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH LDTFHRLGVRIASMTWNRRTMMADGVGEQDAGGRLTTLGLEAVAEMERLGMLVDVSHLSE HHHHHHHHHEEEEEECCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCHHEEHHHHCC TGFWHLASVATRPFVASHSSCRALQPHPRNLTDEQIRAVADSGGFVAINGFGPFLSDAPT CCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCC VDSFLDHVQHAVALVGPERVALGLDFMRDLVDAVDPVLSGALVHPDTPPWVAGLERPADL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHCCCCCHHH AALAARLEETLGPRAGRQVAADTVIDTLTRQLAPAPR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]