Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714365

Identifier: 119714365

GI number: 119714365

Start: 110420

End: 111496

Strand: Reverse

Name: 119714365

Synonym: Noca_0098

Alternate gene names: NA

Gene position: 111496-110420 (Counterclockwise)

Preceding gene: 119714372

Following gene: 119714364

Centisome position: 2.24

GC content: 76.97

Gene sequence:

>1077_bases
ATGAGCCCTCCGGCTTCCCGGACCCTGCGCGCGGCCGACCTCGAGGCGCTGGCGGTCGGCCTGTGCCTGCTGGGCTCGGG
CGGCGCCGGCGACCCGCAGCCCTTCGCCTCCGTGCTGCGCTCGCAGCTCGGTAACGGCGAGCTGGTGCTGCACGCACCCG
GCGGTCTCGGGGGCGCGAGCGTCGTGCCGGTGGGGATGGTGGGGGCCACCAGCGTGTTCACCGAGAAGCTGCCCCACGGC
GGTGAGTTCGGCGCGGCCGTCGCCGCGACCGGACGGTGGACCGGCGCGGCCCCGGACGCGGTGATGGGGATCGAGACGGC
CGGCCTGAACGGCGTCACCGCGCTGGTGGCCGCGCTGCGCATGGGGCTGCCGTACGTCGACGCGGACCTGGCCGGACGCG
GGCTGCCCCGGCTCGACCAGCTGACCTGGGTGACCGCGCAGCTGCCCCTGACCCCGTGCGCCCTCGCGTTCCCGGGCGGC
CACACCTTGCTCGTCGACAGCGCCTCCGCCACCGAGGTGGAGAGGACGATCCGGGCCGCGCTGGCGGGAACCGGCGGCTG
GGCGGCCCTCGCGCTCCCGCCGAGCCCCGCCGCCCTGCTGGACGAGACGGCCTGCGTGGGGACCCTGGGCCGGGCGCTCG
AGCTCGGGCGCGCGCACGACTCGCTGCGCGTGCTGGCGGACGCCGCGGAGGTCGCGGAGGTGCTGGGGGGCGAGGTCCTC
GGCGAGGGCCGCGTGCACGACGTGCTGCGGCACAGCGCGGGCGGCGGGCTGCAGCCCGAGTCGTCGGTGACGGTCCTCGA
CCGGAACGGCCCCGTGCTGCGGATCGAGACGGAGAACGAGTTCTTGATGGTGCTCGTCGACGGCGAGCCCCGGGCCACGG
TCCCCGACCTCATCTGCCTGCTGGACCGCCGGACGAACCGGCCGTTGGCGGTCGACGCCCTCCGGCGCGGCGACGAGGTG
TTCGTGGTGGTCCTGCCGGCTCCCGCGTGGTGGCTCGCACCGGGCCGCCTCGACCGGGTGTCGCCGGCCGCGTTCGCCAT
CGACAGCCCGCCCCTGCTCCTGGGCGGGCGGCCGTGA

Upstream 100 bases:

>100_bases
CCTCGGACATATGTGCACATCGCTCGGTCGCGTCTCACGGGCAAGGCCACCTGCACACGGATCGCCCCCCGGACCGGCGG
CCGGATGCGAGAATGCGGGC

Downstream 100 bases:

>100_bases
GCGCCGCCTCGCCCGTCCCGCTCGTCGCCCTGCTGGCCCATGCCGACTGGCAGCAGGTGAGCGTGCTCGCGGCACCGCCG
GCGCCGACGCTGACCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSPPASRTLRAADLEALAVGLCLLGSGGAGDPQPFASVLRSQLGNGELVLHAPGGLGGASVVPVGMVGATSVFTEKLPHG
GEFGAAVAATGRWTGAAPDAVMGIETAGLNGVTALVAALRMGLPYVDADLAGRGLPRLDQLTWVTAQLPLTPCALAFPGG
HTLLVDSASATEVERTIRAALAGTGGWAALALPPSPAALLDETACVGTLGRALELGRAHDSLRVLADAAEVAEVLGGEVL
GEGRVHDVLRHSAGGGLQPESSVTVLDRNGPVLRIETENEFLMVLVDGEPRATVPDLICLLDRRTNRPLAVDALRRGDEV
FVVVLPAPAWWLAPGRLDRVSPAAFAIDSPPLLLGGRP

Sequences:

>Translated_358_residues
MSPPASRTLRAADLEALAVGLCLLGSGGAGDPQPFASVLRSQLGNGELVLHAPGGLGGASVVPVGMVGATSVFTEKLPHG
GEFGAAVAATGRWTGAAPDAVMGIETAGLNGVTALVAALRMGLPYVDADLAGRGLPRLDQLTWVTAQLPLTPCALAFPGG
HTLLVDSASATEVERTIRAALAGTGGWAALALPPSPAALLDETACVGTLGRALELGRAHDSLRVLADAAEVAEVLGGEVL
GEGRVHDVLRHSAGGGLQPESSVTVLDRNGPVLRIETENEFLMVLVDGEPRATVPDLICLLDRRTNRPLAVDALRRGDEV
FVVVLPAPAWWLAPGRLDRVSPAAFAIDSPPLLLGGRP
>Mature_357_residues
SPPASRTLRAADLEALAVGLCLLGSGGAGDPQPFASVLRSQLGNGELVLHAPGGLGGASVVPVGMVGATSVFTEKLPHGG
EFGAAVAATGRWTGAAPDAVMGIETAGLNGVTALVAALRMGLPYVDADLAGRGLPRLDQLTWVTAQLPLTPCALAFPGGH
TLLVDSASATEVERTIRAALAGTGGWAALALPPSPAALLDETACVGTLGRALELGRAHDSLRVLADAAEVAEVLGGEVLG
EGRVHDVLRHSAGGGLQPESSVTVLDRNGPVLRIETENEFLMVLVDGEPRATVPDLICLLDRRTNRPLAVDALRRGDEVF
VVVLPAPAWWLAPGRLDRVSPAAFAIDSPPLLLGGRP

Specific function: Unknown

COG id: COG3535

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36533; Mature: 36402

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPASRTLRAADLEALAVGLCLLGSGGAGDPQPFASVLRSQLGNGELVLHAPGGLGGAS
CCCCCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
VVPVGMVGATSVFTEKLPHGGEFGAAVAATGRWTGAAPDAVMGIETAGLNGVTALVAALR
CCEECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
MGLPYVDADLAGRGLPRLDQLTWVTAQLPLTPCALAFPGGHTLLVDSASATEVERTIRAA
HCCCEECHHHCCCCCCCCHHEEEEEEECCCCCEEEECCCCCEEEEECCCHHHHHHHHHHH
LAGTGGWAALALPPSPAALLDETACVGTLGRALELGRAHDSLRVLADAAEVAEVLGGEVL
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
GEGRVHDVLRHSAGGGLQPESSVTVLDRNGPVLRIETENEFLMVLVDGEPRATVPDLICL
CCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHHHH
LDRRTNRPLAVDALRRGDEVFVVVLPAPAWWLAPGRLDRVSPAAFAIDSPPLLLGGRP
HHCCCCCCEEHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCEEEECCCCEEECCCC
>Mature Secondary Structure 
SPPASRTLRAADLEALAVGLCLLGSGGAGDPQPFASVLRSQLGNGELVLHAPGGLGGAS
CCCCCCCEEHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
VVPVGMVGATSVFTEKLPHGGEFGAAVAATGRWTGAAPDAVMGIETAGLNGVTALVAALR
CCEECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
MGLPYVDADLAGRGLPRLDQLTWVTAQLPLTPCALAFPGGHTLLVDSASATEVERTIRAA
HCCCEECHHHCCCCCCCCHHEEEEEEECCCCCEEEECCCCCEEEEECCCHHHHHHHHHHH
LAGTGGWAALALPPSPAALLDETACVGTLGRALELGRAHDSLRVLADAAEVAEVLGGEVL
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
GEGRVHDVLRHSAGGGLQPESSVTVLDRNGPVLRIETENEFLMVLVDGEPRATVPDLICL
CCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHHHH
LDRRTNRPLAVDALRRGDEVFVVVLPAPAWWLAPGRLDRVSPAAFAIDSPPLLLGGRP
HHCCCCCCEEHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCEEEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA