Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is attM [H]

Identifier: 119714358

GI number: 119714358

Start: 102208

End: 102804

Strand: Reverse

Name: attM [H]

Synonym: Noca_0090

Alternate gene names: 119714358

Gene position: 102804-102208 (Counterclockwise)

Preceding gene: 119714364

Following gene: 119714355

Centisome position: 2.06

GC content: 73.37

Gene sequence:

>597_bases
ATGGAGCCGCGGCACCACCCGGCCGAGCAGCTCGAGCTCGTGGGCCTGTCCCCGGCCGACATCAGGTTCGTCGTCTACAC
CCACCTGCACCACGACCACGCGGGCGGCGGCCGGCTGTTCCCCGACGCCGAGCACATCGCCCAACGCACCGAGCACCGGT
GGGCACACTGCCCGGATCCGCCCGCCGCCGGCGGGTACGTCGCGACCGACATCGCCGGACCGAGGGCCTGGCGCCTGGCC
GAGGGCGACTGGCACGTCTTCCGGGGCTTCTCGCTGATCTTCACCCCCGGCCACACCCCCGGCCACCAGTCGATCATGCT
GTGGGACGTCCCCGACCTCGGCAACGTGATCCTGGCCGGGGATGCGATCAACACCCACGAGAACATCGACGGCGACCTCC
CGCCCGGCATCGCCACCGACGCGCTGGCGGCGTCGTTCTCGATGCGCCGCCTCACCGCCCTCGCCGACGCCACCGACGCC
GTCATCGTCGCGGGCCACGACCTGGAGCAGTTCCAGGCGATGGCCAAGGCACCCGAGCGGCTCCGGAGGACAGACCGGTG
GCCGGGCCCGGACCGCCGGGGCGTCGCCCGCAGCTAG

Upstream 100 bases:

>100_bases
ACGGGCGCCGCGGTCGAGGTCGGGGCAGCGGTCATGACGCGAAGGCCTCCAGGCCCACCCCGCCTGGGGCACGGAGCTGG
CCGAGAGCACGCGACCCCGC

Downstream 100 bases:

>100_bases
GCCCGCGTCAGCCGAGGTGCGGGTAGCGGTAGTCGGTCGGCGGGTCGAACGTCTCCTTGATGCTCCGCGGGGACGTCCAA
CGCAGCAGGTTCGCGGCCGA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: AHL-lactonase AttM [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEPRHHPAEQLELVGLSPADIRFVVYTHLHHDHAGGGRLFPDAEHIAQRTEHRWAHCPDPPAAGGYVATDIAGPRAWRLA
EGDWHVFRGFSLIFTPGHTPGHQSIMLWDVPDLGNVILAGDAINTHENIDGDLPPGIATDALAASFSMRRLTALADATDA
VIVAGHDLEQFQAMAKAPERLRRTDRWPGPDRRGVARS

Sequences:

>Translated_198_residues
MEPRHHPAEQLELVGLSPADIRFVVYTHLHHDHAGGGRLFPDAEHIAQRTEHRWAHCPDPPAAGGYVATDIAGPRAWRLA
EGDWHVFRGFSLIFTPGHTPGHQSIMLWDVPDLGNVILAGDAINTHENIDGDLPPGIATDALAASFSMRRLTALADATDA
VIVAGHDLEQFQAMAKAPERLRRTDRWPGPDRRGVARS
>Mature_198_residues
MEPRHHPAEQLELVGLSPADIRFVVYTHLHHDHAGGGRLFPDAEHIAQRTEHRWAHCPDPPAAGGYVATDIAGPRAWRLA
EGDWHVFRGFSLIFTPGHTPGHQSIMLWDVPDLGNVILAGDAINTHENIDGDLPPGIATDALAASFSMRRLTALADATDA
VIVAGHDLEQFQAMAKAPERLRRTDRWPGPDRRGVARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: =3.1.1.81 [H]

Molecular weight: Translated: 21706; Mature: 21706

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRHHPAEQLELVGLSPADIRFVVYTHLHHDHAGGGRLFPDAEHIAQRTEHRWAHCPDP
CCCCCCCHHHEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PAAGGYVATDIAGPRAWRLAEGDWHVFRGFSLIFTPGHTPGHQSIMLWDVPDLGNVILAG
CCCCCEEEECCCCCCEEEECCCCEEEEECEEEEEECCCCCCCCEEEEEECCCCCCEEEEC
DAINTHENIDGDLPPGIATDALAASFSMRRLTALADATDAVIVAGHDLEQFQAMAKAPER
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
LRRTDRWPGPDRRGVARS
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPRHHPAEQLELVGLSPADIRFVVYTHLHHDHAGGGRLFPDAEHIAQRTEHRWAHCPDP
CCCCCCCHHHEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PAAGGYVATDIAGPRAWRLAEGDWHVFRGFSLIFTPGHTPGHQSIMLWDVPDLGNVILAG
CCCCCEEEECCCCCCEEEECCCCEEEEECEEEEEECCCCCCCCEEEEEECCCCCCEEEEC
DAINTHENIDGDLPPGIATDALAASFSMRRLTALADATDAVIVAGHDLEQFQAMAKAPER
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
LRRTDRWPGPDRRGVARS
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10786639; 11743194 [H]