Click here to switch to the map view.

The map label for this gene is aldH [H]

Identifier: 119714354

GI number: 119714354

Start: 96812

End: 98341

Strand: Direct

Name: aldH [H]

Synonym: Noca_0086

Alternate gene names: 119714354

Gene position: 96812-98341 (Clockwise)

Preceding gene: 119714353

Following gene: 119714356

Centisome position: 1.94

GC content: 72.55

Gene sequence:

>1530_bases
ATGGACGGATCCGAGACCCCGGACGACCGCCAGCCGCCCGCGACGGTGGAGCTGATGGCACGAGCCGCGGCCGACGCATT
CCCCGCCTGGTCGGCGACGCCTCCCCGGCAGCGTGCCTCCGCGCTGTCGGCGGTGGCGGACGCCGTCGCGACCGCAGGCC
CGGAGCTGATCGCCACCGCCATGTCCGAGACCGGTCTGCCGGAGGCGCGGCTCACCGGTGAGCTGAACCGCACGGTCGTC
CAGATCCGCCTGTTCGCCGACATCGTCGTCGACGGCGCCTACCTCGACGTGCGCATCGACGAGGCGGACGACGACTTCGT
CCTGGACAGCCGACCGGACCTGCGCCGCTACCACGTGCCGGTCGGACCCGTGCTGAACTTCGCCGCGAGCAACTTCCCCT
TCGCGTTCTCGGTCATCGGAGGCGACACCGTCTCGGCGCTGGCTGCCGGGTGCCCGGTCGTCGTCAAGGCGCACCCGGGA
CACCTGGAGCTGTCGAGGCAGACCGCCGCCGTCGTCCGCGCTGCCCTCACCGGAAGCGGTGCGCCCGACGCGACACTCCA
GCTGCTGGTCGGGCAGGAGCAGGGCGTGGCGATGCTGCTCGACCCGCGCATCCGTGCCGCCAGCTTCACGGGCTCGACCC
GGGCCGGCCGCATGCTGGCCGATCTCGCCCTGGGCCGGCCGGCACCGATCCCCTTCTACGGCGAGCTCGGGAGCGTGAAC
CCGGCGTTCGTCACGTCCGAGGCAGCGGCCCAGCACGGTGCGGCGATCGCGCAGGGATTCCTCACGAGCGTGTGCGGGTC
CGCCGGCCAGCTGTGCACCAAGCCGGGCTTCCTCTTCGTGCCCCGCGGGAGCGGCGTCACGGCCGATGTCGCGCAAGCGG
CTGGTGCGGTGGTCGAACAGCGTCTTCTCAACCCGTCCATCACCGCTGGCTACACCGCGCGGCGGGACGCCATCCTCGGG
ACGCCCGGGGTTCGCGCTCTCGCCGTGGGGGACGTACGTGTCGACGGCGACGGACAGGGCTGGGCGACACCGACGTTGGT
GGCGACCGATGTCGCGACGCTCCACCACCACCGTGAGTCGCTGCTCGACGAGGCGTTCGGCCCACTGTCGGTCGTCGTGG
AGTACGACGACGAGGCAGGGCTGCCCGGAGTCGCCGACGAGCTGTTCGAGGGCAACCTCACCAGCACCATCCATGCGGGT
GACGGTGAGGACACGCCCACGTTGCGCGCTCTCGTCGACTGGGCCGCGCGGACCACCGGCCGCATCGTCTTCGGGGGTTG
GCCGACCGGCGTGTCCGTGACTCATGCGACCCAGCACGGGGGGCCCTGGCCGGCGACGACGAACGACGCCGGGACGTCGG
TTGGGAGCGCGGCCATCGGGAGGTTTCTGCGCGCCGTCGCCTACCAGGACACGCCGCAAGCACTGCTTCCGGCGCCGTTG
CGCGACGACAACCCGTGGGGTGTGCCGCAGCTGCGCTCGCCCGCCGGTCGGTCGCGGAGCTGGGGCGAGGCGTTCCGCGT
CGACGGGTGA

Upstream 100 bases:

>100_bases
GCGCGGCCCGCTCAGCCCTGCCCAGGAGTCCGCGGTCCGCAGCGAGACCGAGCGGGCGCTCGCCGCGATCGCTGCCCGCC
GTTCGGCGTCGGTGGCCTGA

Downstream 100 bases:

>100_bases
CGGATCGCGTCGACTCGCACGGTCGAGGAGGCGATGCCGCTCAGTGCCCCGGGCGGGACGGGAGCACGAAGGGGGCGATC
TCGAGGGCCAGGTGCAGGCG

Product: aldehyde dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MDGSETPDDRQPPATVELMARAAADAFPAWSATPPRQRASALSAVADAVATAGPELIATAMSETGLPEARLTGELNRTVV
QIRLFADIVVDGAYLDVRIDEADDDFVLDSRPDLRRYHVPVGPVLNFAASNFPFAFSVIGGDTVSALAAGCPVVVKAHPG
HLELSRQTAAVVRAALTGSGAPDATLQLLVGQEQGVAMLLDPRIRAASFTGSTRAGRMLADLALGRPAPIPFYGELGSVN
PAFVTSEAAAQHGAAIAQGFLTSVCGSAGQLCTKPGFLFVPRGSGVTADVAQAAGAVVEQRLLNPSITAGYTARRDAILG
TPGVRALAVGDVRVDGDGQGWATPTLVATDVATLHHHRESLLDEAFGPLSVVVEYDDEAGLPGVADELFEGNLTSTIHAG
DGEDTPTLRALVDWAARTTGRIVFGGWPTGVSVTHATQHGGPWPATTNDAGTSVGSAAIGRFLRAVAYQDTPQALLPAPL
RDDNPWGVPQLRSPAGRSRSWGEAFRVDG

Sequences:

>Translated_509_residues
MDGSETPDDRQPPATVELMARAAADAFPAWSATPPRQRASALSAVADAVATAGPELIATAMSETGLPEARLTGELNRTVV
QIRLFADIVVDGAYLDVRIDEADDDFVLDSRPDLRRYHVPVGPVLNFAASNFPFAFSVIGGDTVSALAAGCPVVVKAHPG
HLELSRQTAAVVRAALTGSGAPDATLQLLVGQEQGVAMLLDPRIRAASFTGSTRAGRMLADLALGRPAPIPFYGELGSVN
PAFVTSEAAAQHGAAIAQGFLTSVCGSAGQLCTKPGFLFVPRGSGVTADVAQAAGAVVEQRLLNPSITAGYTARRDAILG
TPGVRALAVGDVRVDGDGQGWATPTLVATDVATLHHHRESLLDEAFGPLSVVVEYDDEAGLPGVADELFEGNLTSTIHAG
DGEDTPTLRALVDWAARTTGRIVFGGWPTGVSVTHATQHGGPWPATTNDAGTSVGSAAIGRFLRAVAYQDTPQALLPAPL
RDDNPWGVPQLRSPAGRSRSWGEAFRVDG
>Mature_509_residues
MDGSETPDDRQPPATVELMARAAADAFPAWSATPPRQRASALSAVADAVATAGPELIATAMSETGLPEARLTGELNRTVV
QIRLFADIVVDGAYLDVRIDEADDDFVLDSRPDLRRYHVPVGPVLNFAASNFPFAFSVIGGDTVSALAAGCPVVVKAHPG
HLELSRQTAAVVRAALTGSGAPDATLQLLVGQEQGVAMLLDPRIRAASFTGSTRAGRMLADLALGRPAPIPFYGELGSVN
PAFVTSEAAAQHGAAIAQGFLTSVCGSAGQLCTKPGFLFVPRGSGVTADVAQAAGAVVEQRLLNPSITAGYTARRDAILG
TPGVRALAVGDVRVDGDGQGWATPTLVATDVATLHHHRESLLDEAFGPLSVVVEYDDEAGLPGVADELFEGNLTSTIHAG
DGEDTPTLRALVDWAARTTGRIVFGGWPTGVSVTHATQHGGPWPATTNDAGTSVGSAAIGRFLRAVAYQDTPQALLPAPL
RDDNPWGVPQLRSPAGRSRSWGEAFRVDG

Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=393, Percent_Identity=28.2442748091603, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87081896, Length=370, Percent_Identity=26.2162162162162, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.4 [H]

Molecular weight: Translated: 52746; Mature: 52746

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGSETPDDRQPPATVELMARAAADAFPAWSATPPRQRASALSAVADAVATAGPELIATA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MSETGLPEARLTGELNRTVVQIRLFADIVVDGAYLDVRIDEADDDFVLDSRPDLRRYHVP
HHHCCCCHHHHHCCCCCEEEEEEEEEHHHCCCEEEEEEECCCCCCEEECCCCCCEEEECC
VGPVLNFAASNFPFAFSVIGGDTVSALAAGCPVVVKAHPGHLELSRQTAAVVRAALTGSG
CCHHHHHHCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCC
APDATLQLLVGQEQGVAMLLDPRIRAASFTGSTRAGRMLADLALGRPAPIPFYGELGSVN
CCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PAFVTSEAAAQHGAAIAQGFLTSVCGSAGQLCTKPGFLFVPRGSGVTADVAQAAGAVVEQ
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
RLLNPSITAGYTARRDAILGTPGVRALAVGDVRVDGDGQGWATPTLVATDVATLHHHRES
HHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LLDEAFGPLSVVVEYDDEAGLPGVADELFEGNLTSTIHAGDGEDTPTLRALVDWAARTTG
HHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
RIVFGGWPTGVSVTHATQHGGPWPATTNDAGTSVGSAAIGRFLRAVAYQDTPQALLPAPL
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCC
RDDNPWGVPQLRSPAGRSRSWGEAFRVDG
CCCCCCCCCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MDGSETPDDRQPPATVELMARAAADAFPAWSATPPRQRASALSAVADAVATAGPELIATA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
MSETGLPEARLTGELNRTVVQIRLFADIVVDGAYLDVRIDEADDDFVLDSRPDLRRYHVP
HHHCCCCHHHHHCCCCCEEEEEEEEEHHHCCCEEEEEEECCCCCCEEECCCCCCEEEECC
VGPVLNFAASNFPFAFSVIGGDTVSALAAGCPVVVKAHPGHLELSRQTAAVVRAALTGSG
CCHHHHHHCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCC
APDATLQLLVGQEQGVAMLLDPRIRAASFTGSTRAGRMLADLALGRPAPIPFYGELGSVN
CCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PAFVTSEAAAQHGAAIAQGFLTSVCGSAGQLCTKPGFLFVPRGSGVTADVAQAAGAVVEQ
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
RLLNPSITAGYTARRDAILGTPGVRALAVGDVRVDGDGQGWATPTLVATDVATLHHHRES
HHCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LLDEAFGPLSVVVEYDDEAGLPGVADELFEGNLTSTIHAGDGEDTPTLRALVDWAARTTG
HHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
RIVFGGWPTGVSVTHATQHGGPWPATTNDAGTSVGSAAIGRFLRAVAYQDTPQALLPAPL
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCC
RDDNPWGVPQLRSPAGRSRSWGEAFRVDG
CCCCCCCCCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8527447; 10903148 [H]