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The map label for this gene is ycjP [C]

Identifier: 119714332

GI number: 119714332

Start: 69064

End: 69957

Strand: Direct

Name: ycjP [C]

Synonym: Noca_0061

Alternate gene names: 119714332

Gene position: 69064-69957 (Clockwise)

Preceding gene: 119714331

Following gene: 119714333

Centisome position: 1.39

GC content: 62.98

Gene sequence:

>894_bases
ATGACGACACTGACTGACACCGAACGCTACCGACGCAGCCCTGCAGTACCCCATGGCGGCGACCGGCCGCGACGCACCGG
GCTGGCCATCACGGGCGTGGCTGCCTACCTGATCACCTTCACCATCGTCCTGCCGATCCTGTGGATCGCCCTGCTGTCAT
TCCAGCCCAGCGACACGATCCTCTCCGACCCGTTCTCGCTCAACAATCTGACCTTCGAGAACTACCGGAACGCAATTGCC
AACCTCCCGTTGGCGCAGATGTACAAGAACACCATCATCGTCGCGCTCGCGTCCGTCACGCTTGGCGCCGTCGTGTCCTT
CATGGCTTCGTTCGCGCTCACCCGAATGGTCTTCCGCCATAGGCGAGCCCAAGACTCCGTCCGGTTCTACCTGCTCGCGG
GACTCGCCGTACCGGTCTACGTGCTGCTCTTCCCGATCTACCGGCTCGATCTCGCGCTGGGGATCTTCGGGACCTACGCC
GCCTTGATCCTCCCCTACATCGCGGTGTCCATCCCCTTCAACACTCTCCTCATGACCGGGTTCCTCCGGGACTTCCCGGC
CGAGCTGGAGGAGGCCGCGATCATGGACGGTGCGGGGCTCCTCCGGATCTGCTGGTCGGTGGTGCTTCCGACGATGAGGC
CCGTGATCGCCACGATCCTGATCTTCAACGTGGTCTACGTGTTCAACGAGTTTCCCTTCGTGTCGATCCTCATCAACGAC
CCCGACCTTGCGACGGTGTCGCTCGCCGTATCGAAGTTCCAGGGGCAGTACACCGTCGACTACGGCGGCATGATGGCAGC
GGCCACGCTAGTGCTGCTTCCCCAGCTCGTCATTTATGCCTTCTTCCAGCGCCACGTGATCGCGGGCCTCACGGCCGGTG
CCGTCAAGGGCTGA

Upstream 100 bases:

>100_bases
GCGGCGACGGAGCCTCGCATGAGTTCACGGCCGCGGACACCGCCCCGGCGGACCGCCAGCAGACGCCCGTCCGACACCCA
CCGATGCAGCGAGCAGCCCC

Downstream 100 bases:

>100_bases
CGATGTCATCGATTGAGCGACCGGACGTCCTCGACGACGCCTCCGGTCGGGACCAGCAGTGAACAGCCCTGGCGTCCTCG
TCATAGGCGAAGCCCTGATC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTTLTDTERYRRSPAVPHGGDRPRRTGLAITGVAAYLITFTIVLPILWIALLSFQPSDTILSDPFSLNNLTFENYRNAIA
NLPLAQMYKNTIIVALASVTLGAVVSFMASFALTRMVFRHRRAQDSVRFYLLAGLAVPVYVLLFPIYRLDLALGIFGTYA
ALILPYIAVSIPFNTLLMTGFLRDFPAELEEAAIMDGAGLLRICWSVVLPTMRPVIATILIFNVVYVFNEFPFVSILIND
PDLATVSLAVSKFQGQYTVDYGGMMAAATLVLLPQLVIYAFFQRHVIAGLTAGAVKG

Sequences:

>Translated_297_residues
MTTLTDTERYRRSPAVPHGGDRPRRTGLAITGVAAYLITFTIVLPILWIALLSFQPSDTILSDPFSLNNLTFENYRNAIA
NLPLAQMYKNTIIVALASVTLGAVVSFMASFALTRMVFRHRRAQDSVRFYLLAGLAVPVYVLLFPIYRLDLALGIFGTYA
ALILPYIAVSIPFNTLLMTGFLRDFPAELEEAAIMDGAGLLRICWSVVLPTMRPVIATILIFNVVYVFNEFPFVSILIND
PDLATVSLAVSKFQGQYTVDYGGMMAAATLVLLPQLVIYAFFQRHVIAGLTAGAVKG
>Mature_296_residues
TTLTDTERYRRSPAVPHGGDRPRRTGLAITGVAAYLITFTIVLPILWIALLSFQPSDTILSDPFSLNNLTFENYRNAIAN
LPLAQMYKNTIIVALASVTLGAVVSFMASFALTRMVFRHRRAQDSVRFYLLAGLAVPVYVLLFPIYRLDLALGIFGTYAA
LILPYIAVSIPFNTLLMTGFLRDFPAELEEAAIMDGAGLLRICWSVVLPTMRPVIATILIFNVVYVFNEFPFVSILINDP
DLATVSLAVSKFQGQYTVDYGGMMAAATLVLLPQLVIYAFFQRHVIAGLTAGAVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=273, Percent_Identity=25.2747252747253, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789860, Length=228, Percent_Identity=29.8245614035088, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=218, Percent_Identity=27.0642201834862, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32669; Mature: 32538

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLTDTERYRRSPAVPHGGDRPRRTGLAITGVAAYLITFTIVLPILWIALLSFQPSDTI
CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LSDPFSLNNLTFENYRNAIANLPLAQMYKNTIIVALASVTLGAVVSFMASFALTRMVFRH
HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAQDSVRFYLLAGLAVPVYVLLFPIYRLDLALGIFGTYAALILPYIAVSIPFNTLLMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FLRDFPAELEEAAIMDGAGLLRICWSVVLPTMRPVIATILIFNVVYVFNEFPFVSILIND
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDLATVSLAVSKFQGQYTVDYGGMMAAATLVLLPQLVIYAFFQRHVIAGLTAGAVKG
CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTLTDTERYRRSPAVPHGGDRPRRTGLAITGVAAYLITFTIVLPILWIALLSFQPSDTI
CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LSDPFSLNNLTFENYRNAIANLPLAQMYKNTIIVALASVTLGAVVSFMASFALTRMVFRH
HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAQDSVRFYLLAGLAVPVYVLLFPIYRLDLALGIFGTYAALILPYIAVSIPFNTLLMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FLRDFPAELEEAAIMDGAGLLRICWSVVLPTMRPVIATILIFNVVYVFNEFPFVSILIND
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDLATVSLAVSKFQGQYTVDYGGMMAAATLVLLPQLVIYAFFQRHVIAGLTAGAVKG
CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]