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The map label for this gene is yurN [H]

Identifier: 119714314

GI number: 119714314

Start: 48055

End: 49050

Strand: Direct

Name: yurN [H]

Synonym: Noca_0042

Alternate gene names: 119714314

Gene position: 48055-49050 (Clockwise)

Preceding gene: 119714313

Following gene: 119714315

Centisome position: 0.96

GC content: 64.46

Gene sequence:

>996_bases
ATGAGAGCGCGCGCGATCCCAGAAGCTGAGCCCGAGAGCGTTGTCGCGGCTCCACCCGCGGACCGAAGTAGCGGACAGCT
TCGGCAGCGGCGGGAGCGGCGGCAACGCCGGCAGCGGCCCCGTGGGGACTGGCTCAACCTCCTGCTGTTCCTCGGCGTCC
CGATCGTCCTCATCGTGGCAGTCGAGATCATTCCCATGCTGGGCGTGGTCTGGATCAGCCTCACCGACTACAACCCGCTC
GAGCCGGACAGCTGGACGGAGTTCGTCGGCGGCGAGAACTACAGTCGCATGCTCGACGACTCCCTGTTCTGGAAGTCGCT
CGGGAACACCTTCTTCTTCGCGGTCCTGTACCTCCCGATCTCGATCCTCGGTGCACTCCTCGCGGCGACGCTCTTGAACC
AGAATCTCCGCGGGAGGCTGGTCTACCGAGGCATCTTCTTCATGCCCGTGGTGGTGTCCTGGGTCGTGGCCTCCACCATG
ATCATGTGGTTCCTGGACCCCTCCTCAGGGTTTGTCTCGATGGTCAGCCAGGAGCTCGGTTTCGGCCGGCTGCCGCAGCT
GCTGCAGGACGAGTCGACCGCCATGCCAGCGGTCGCGTTCGTCGCGATCTGGAAGTACTTCGGCTACAACACCGTCATCT
ACCTGGCTGGCCTGCAGTCGGTGAATCCTGCGCTGGAGGAGGCGGCCAAGGTCGACGGGGCTTCCGCGTTCGGCCGGTTC
TGGTACGTCACGTTGCCGGCCCTGCGCCCCGTGACCGCGGTCGTGGTCATGCTCAACATGATCCAGGCGATCCGGATCTT
CGACCCCATGCTGATCATGACGAACGGCGGTCCGAACTACGCGACCACCTCGACGGTCCTCTACGTCTACCGCATGGCGT
GGGACAACCTCGAGTTCGGCTACGGCAGCGCCATCACCGGCGCCCTTTCGCTGATCATCTTCGCGATCGCGGGCCTCCAG
TTCTGGTTCTTCAACCGAAGGAGCGTCGAGGGGTGA

Upstream 100 bases:

>100_bases
ACGGCGAGGACGTCAAGTCCGTCGTCGACTCGACCGCGACCGACATGATCCAAGCCCTGCAGAACGCCTGACGCCTCGGT
GACAGGGCGGAGAGGTCACC

Downstream 100 bases:

>100_bases
GCATCCTTCCCGTGAGTACCCGCCGGCCCGCGCGCCCGGTCCGCGAAACGCCGCGGACCTGGCTCTCGAAGGCGGTGACC
TACGTCCTGCTGACCCTGGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRARAIPEAEPESVVAAPPADRSSGQLRQRRERRQRRQRPRGDWLNLLLFLGVPIVLIVAVEIIPMLGVVWISLTDYNPL
EPDSWTEFVGGENYSRMLDDSLFWKSLGNTFFFAVLYLPISILGALLAATLLNQNLRGRLVYRGIFFMPVVVSWVVASTM
IMWFLDPSSGFVSMVSQELGFGRLPQLLQDESTAMPAVAFVAIWKYFGYNTVIYLAGLQSVNPALEEAAKVDGASAFGRF
WYVTLPALRPVTAVVVMLNMIQAIRIFDPMLIMTNGGPNYATTSTVLYVYRMAWDNLEFGYGSAITGALSLIIFAIAGLQ
FWFFNRRSVEG

Sequences:

>Translated_331_residues
MRARAIPEAEPESVVAAPPADRSSGQLRQRRERRQRRQRPRGDWLNLLLFLGVPIVLIVAVEIIPMLGVVWISLTDYNPL
EPDSWTEFVGGENYSRMLDDSLFWKSLGNTFFFAVLYLPISILGALLAATLLNQNLRGRLVYRGIFFMPVVVSWVVASTM
IMWFLDPSSGFVSMVSQELGFGRLPQLLQDESTAMPAVAFVAIWKYFGYNTVIYLAGLQSVNPALEEAAKVDGASAFGRF
WYVTLPALRPVTAVVVMLNMIQAIRIFDPMLIMTNGGPNYATTSTVLYVYRMAWDNLEFGYGSAITGALSLIIFAIAGLQ
FWFFNRRSVEG
>Mature_331_residues
MRARAIPEAEPESVVAAPPADRSSGQLRQRRERRQRRQRPRGDWLNLLLFLGVPIVLIVAVEIIPMLGVVWISLTDYNPL
EPDSWTEFVGGENYSRMLDDSLFWKSLGNTFFFAVLYLPISILGALLAATLLNQNLRGRLVYRGIFFMPVVVSWVVASTM
IMWFLDPSSGFVSMVSQELGFGRLPQLLQDESTAMPAVAFVAIWKYFGYNTVIYLAGLQSVNPALEEAAKVDGASAFGRF
WYVTLPALRPVTAVVVMLNMIQAIRIFDPMLIMTNGGPNYATTSTVLYVYRMAWDNLEFGYGSAITGALSLIIFAIAGLQ
FWFFNRRSVEG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=28.719723183391, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=32.3076923076923, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=27.2, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37077; Mature: 37077

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARAIPEAEPESVVAAPPADRSSGQLRQRRERRQRRQRPRGDWLNLLLFLGVPIVLIVA
CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VEIIPMLGVVWISLTDYNPLEPDSWTEFVGGENYSRMLDDSLFWKSLGNTFFFAVLYLPI
HHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILGALLAATLLNQNLRGRLVYRGIFFMPVVVSWVVASTMIMWFLDPSSGFVSMVSQELG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCC
FGRLPQLLQDESTAMPAVAFVAIWKYFGYNTVIYLAGLQSVNPALEEAAKVDGASAFGRF
CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHCCCHHHHHHH
WYVTLPALRPVTAVVVMLNMIQAIRIFDPMLIMTNGGPNYATTSTVLYVYRMAWDNLEFG
HEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
YGSAITGALSLIIFAIAGLQFWFFNRRSVEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRARAIPEAEPESVVAAPPADRSSGQLRQRRERRQRRQRPRGDWLNLLLFLGVPIVLIVA
CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VEIIPMLGVVWISLTDYNPLEPDSWTEFVGGENYSRMLDDSLFWKSLGNTFFFAVLYLPI
HHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILGALLAATLLNQNLRGRLVYRGIFFMPVVVSWVVASTMIMWFLDPSSGFVSMVSQELG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCC
FGRLPQLLQDESTAMPAVAFVAIWKYFGYNTVIYLAGLQSVNPALEEAAKVDGASAFGRF
CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHCCCHHHHHHH
WYVTLPALRPVTAVVVMLNMIQAIRIFDPMLIMTNGGPNYATTSTVLYVYRMAWDNLEFG
HEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
YGSAITGALSLIIFAIAGLQFWFFNRRSVEG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]