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The map label for this gene is ycjN [C]

Identifier: 119714313

GI number: 119714313

Start: 46643

End: 48025

Strand: Direct

Name: ycjN [C]

Synonym: Noca_0041

Alternate gene names: 119714313

Gene position: 46643-48025 (Clockwise)

Preceding gene: 119714312

Following gene: 119714314

Centisome position: 0.94

GC content: 67.03

Gene sequence:

>1383_bases
ATGGCACTACGGAAGCAGCACACCAAGGTCTCGGGAGTCACCAGCGGCGCCTGGTCGTCCGCCGCCGCCTCGCCGTTCTC
GCGGCGCGGACTGCTCAAGGCCGGCGGGCTCGCTGCCGGTGCCGTCGCCGCCGCCCCGCTGCTCTCGGCCTGCGGCCGCG
GGTCCGGCAGCGGCTCCTCGGGCAGCAGCTACAACATGTGGGTCATGTCGGACACCGTGCCGATCATGAAGCACTTCGTG
GCCAAGTACCGCGAGAGCGAGGACAGCAAGTTCAACGCGAACATCACCGAGATCCCCTCGGGCATGTCGCTGCGCGCCAA
GATCATCTCCGCCTCGGCTGCCGGCCAGCTGCCCGAGCTGCTCGACGTCTCGATGAACTACAGCTCGGACTTCGCCACCT
ACAACCTGTTCGAGCCGCTCGACTCGCTGATCTCGTCCGACCTGGCGTCGAAGTACTCTCTCTACGACCGCGTCTGGAAG
TGGGCCGACACCGCGAGCATCCCGGGCTACGAGGGCGACCAGCAGGTCTTCGGGATCCCCTACGGTGTCTCCGTGTTCGT
CCCGACGTACCGGGCCGACCTCTTCCGGGAGGCCGGTGTGGAGTTCCCGACGACCTGGGAGGAGCTGGTCACCGTCGGAC
AGGCGCTGACCCAGGCGCCCCAGCGCTACGCGCTGTCGGTGCCGACCTCGGGCGACCTGATGGACGAGTTCCACCCCTTC
CTGATGCAGGCCGGCGCCCAGTACGTCAACGACGACCTCACCGAAGCCTTCCCGAACCGGGAGGCCGCCTACGACGGTTT
CGAGTTCTATCGCGACCTCTCGGCGCGCTACAAGATCGCGCCGAAGGAGGCGCCGGACCGCTTCGCCGGCGACCCCGTGC
AGCGCCTGACCTCCGGCCAGGTGGCGGTGACGACGCTCTCGGTGCTCAGCGTCAACGCGATGCGCAACGAGGCAACCGAC
CTCGAGTTCGGCCCCGACAAGGACTGGTACATCTCGAAGTTCTGGTCGGGCTCGGGCGGCCCGGGCGGCTACTTCAACGC
CAACTGCATGCACATCCGCAAGGGCGTCAAGAACGTCGACGGTGCCATCGGCTTCATGGAGTGGATGCTCGAGCCGGAGC
AGCAGGCGGAGATGTACAAGTCGTTCAACCGCCCCCCGATGAACACGACGGTGTGGGACGGCGAGCTGGGCGATGACCCG
GAGTTCCAGATCTACCGCGAGTCGATCGAGCTCAGCGAGCGCCAGGGCGGGTTCCGCGGGTGGAAGCTGGCCGAGTTCAC
CATCGACCGAGGAGTCGAGCGTGTCGTCATCGACGGCGAGGACGTCAAGTCCGTCGTCGACTCGACCGCGACCGACATGA
TCCAAGCCCTGCAGAACGCCTGA

Upstream 100 bases:

>100_bases
CCGCGAGCTAACGGCCCTGCTGGTGCCGTGACCTCGACCCATCCGGGCCGCCGCCAGAGCCTGCTCTGAGCGAGCCCACC
GTCTCGTCCTAGGAGAACGC

Downstream 100 bases:

>100_bases
CGCCTCGGTGACAGGGCGGAGAGGTCACCATGAGAGCGCGCGCGATCCCAGAAGCTGAGCCCGAGAGCGTTGTCGCGGCT
CCACCCGCGGACCGAAGTAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MALRKQHTKVSGVTSGAWSSAAASPFSRRGLLKAGGLAAGAVAAAPLLSACGRGSGSGSSGSSYNMWVMSDTVPIMKHFV
AKYRESEDSKFNANITEIPSGMSLRAKIISASAAGQLPELLDVSMNYSSDFATYNLFEPLDSLISSDLASKYSLYDRVWK
WADTASIPGYEGDQQVFGIPYGVSVFVPTYRADLFREAGVEFPTTWEELVTVGQALTQAPQRYALSVPTSGDLMDEFHPF
LMQAGAQYVNDDLTEAFPNREAAYDGFEFYRDLSARYKIAPKEAPDRFAGDPVQRLTSGQVAVTTLSVLSVNAMRNEATD
LEFGPDKDWYISKFWSGSGGPGGYFNANCMHIRKGVKNVDGAIGFMEWMLEPEQQAEMYKSFNRPPMNTTVWDGELGDDP
EFQIYRESIELSERQGGFRGWKLAEFTIDRGVERVVIDGEDVKSVVDSTATDMIQALQNA

Sequences:

>Translated_460_residues
MALRKQHTKVSGVTSGAWSSAAASPFSRRGLLKAGGLAAGAVAAAPLLSACGRGSGSGSSGSSYNMWVMSDTVPIMKHFV
AKYRESEDSKFNANITEIPSGMSLRAKIISASAAGQLPELLDVSMNYSSDFATYNLFEPLDSLISSDLASKYSLYDRVWK
WADTASIPGYEGDQQVFGIPYGVSVFVPTYRADLFREAGVEFPTTWEELVTVGQALTQAPQRYALSVPTSGDLMDEFHPF
LMQAGAQYVNDDLTEAFPNREAAYDGFEFYRDLSARYKIAPKEAPDRFAGDPVQRLTSGQVAVTTLSVLSVNAMRNEATD
LEFGPDKDWYISKFWSGSGGPGGYFNANCMHIRKGVKNVDGAIGFMEWMLEPEQQAEMYKSFNRPPMNTTVWDGELGDDP
EFQIYRESIELSERQGGFRGWKLAEFTIDRGVERVVIDGEDVKSVVDSTATDMIQALQNA
>Mature_459_residues
ALRKQHTKVSGVTSGAWSSAAASPFSRRGLLKAGGLAAGAVAAAPLLSACGRGSGSGSSGSSYNMWVMSDTVPIMKHFVA
KYRESEDSKFNANITEIPSGMSLRAKIISASAAGQLPELLDVSMNYSSDFATYNLFEPLDSLISSDLASKYSLYDRVWKW
ADTASIPGYEGDQQVFGIPYGVSVFVPTYRADLFREAGVEFPTTWEELVTVGQALTQAPQRYALSVPTSGDLMDEFHPFL
MQAGAQYVNDDLTEAFPNREAAYDGFEFYRDLSARYKIAPKEAPDRFAGDPVQRLTSGQVAVTTLSVLSVNAMRNEATDL
EFGPDKDWYISKFWSGSGGPGGYFNANCMHIRKGVKNVDGAIGFMEWMLEPEQQAEMYKSFNRPPMNTTVWDGELGDDPE
FQIYRESIELSERQGGFRGWKLAEFTIDRGVERVVIDGEDVKSVVDSTATDMIQALQNA

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50442; Mature: 50311

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRKQHTKVSGVTSGAWSSAAASPFSRRGLLKAGGLAAGAVAAAPLLSACGRGSGSGSS
CCCCCCCCHHCCCCCCCCCHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
GSSYNMWVMSDTVPIMKHFVAKYRESEDSKFNANITEIPSGMSLRAKIISASAAGQLPEL
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCHHH
LDVSMNYSSDFATYNLFEPLDSLISSDLASKYSLYDRVWKWADTASIPGYEGDQQVFGIP
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
YGVSVFVPTYRADLFREAGVEFPTTWEELVTVGQALTQAPQRYALSVPTSGDLMDEFHPF
CCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHH
LMQAGAQYVNDDLTEAFPNREAAYDGFEFYRDLSARYKIAPKEAPDRFAGDPVQRLTSGQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHCCCC
VAVTTLSVLSVNAMRNEATDLEFGPDKDWYISKFWSGSGGPGGYFNANCMHIRKGVKNVD
CCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
GAIGFMEWMLEPEQQAEMYKSFNRPPMNTTVWDGELGDDPEFQIYRESIELSERQGGFRG
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
WKLAEFTIDRGVERVVIDGEDVKSVVDSTATDMIQALQNA
CEEEEEEHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALRKQHTKVSGVTSGAWSSAAASPFSRRGLLKAGGLAAGAVAAAPLLSACGRGSGSGSS
CCCCCCCHHCCCCCCCCCHHHCCCHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
GSSYNMWVMSDTVPIMKHFVAKYRESEDSKFNANITEIPSGMSLRAKIISASAAGQLPEL
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCHHH
LDVSMNYSSDFATYNLFEPLDSLISSDLASKYSLYDRVWKWADTASIPGYEGDQQVFGIP
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
YGVSVFVPTYRADLFREAGVEFPTTWEELVTVGQALTQAPQRYALSVPTSGDLMDEFHPF
CCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHH
LMQAGAQYVNDDLTEAFPNREAAYDGFEFYRDLSARYKIAPKEAPDRFAGDPVQRLTSGQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHCCCC
VAVTTLSVLSVNAMRNEATDLEFGPDKDWYISKFWSGSGGPGGYFNANCMHIRKGVKNVD
CCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
GAIGFMEWMLEPEQQAEMYKSFNRPPMNTTVWDGELGDDPEFQIYRESIELSERQGGFRG
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
WKLAEFTIDRGVERVVIDGEDVKSVVDSTATDMIQALQNA
CEEEEEEHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA