| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is hmuV [H]
Identifier: 119387090
GI number: 119387090
Start: 1578800
End: 1579555
Strand: Direct
Name: hmuV [H]
Synonym: Pden_4385
Alternate gene names: 119387090
Gene position: 1578800-1579555 (Clockwise)
Preceding gene: 119387089
Following gene: 119387099
Centisome position: 91.25
GC content: 75.0
Gene sequence:
>756_bases ATGCTTGAGCTTCGCGCCCTCTCGTTCCACCGCGCCGGGCAGCCGGTGCTGGACGGTATCGACCTGCGGCTGGGGCCGGG CGAGTTCGTCGGCCTGCTCGGCCCGAACGGCGCCGGCAAGACCACGCTTCTGCGTGCGGCGCTGGGACTGCTGCCGGCGC GCGGTCACAGCTCGCTGGCCGCGCTGCCGGTGCGCGAGCGCGCCCGCGCCGCCGCCTATATGCCACAGGGCCGCGAGATC GCCTGGCCGATGCCGGTCGAGGCGCTGGTGGCGCTTGGCCGCATCGCCCATCCGCATTCCGCCAGCGCTGCCGACCGCGC CGCCATCGAGCGCGCCATCGCGGCCTTGCACCTGGACCCGCTGCGCCACCGCCGCGCGACCGAGCTGTCGGGGGGCGAAC AGGCGCGAACGCTGATCGCCCGGGCGCTGGCACAGGAAACGCCGCTGCTGATCGCGGACGAGCCCATCGCCGGGCTGGAC CCCGCGGCGCAGATCGACGTGATGCGGCTGTTCCGCCGGCTGGCCGGTCAGGGCCATGCGGTGCTGGCCTCGCTGCATGA CCTGGGGCTGGCGGCGCGGCATTGCACGCGGCTCGTCATGCTGCACCAGGGCCGGATCGCCGCCGATGGTCCGCCCGAGG CGGTGCTGACCGCCCAGAACCTCGCCCGCGTCTTCGGCATCACCGCCCATGTGGCGCCGGGGCCCGGCGGCATCCTGTTC CAGCCGCTCGACACCATCGGGGGCGGCGCCCCGTGA
Upstream 100 bases:
>100_bases CGCCGGGCCATGACCTCAAGCTTGGTGTGCTGACGGCGCTGGTGGGGGCGCCCTTCTTCCTGCACCTGATCCTCAGGACC CGGCGCGAGGGGCTGTGACC
Downstream 100 bases:
>100_bases CGGGCATGCCGCGCCACTGAGCCGGGGCCGATGGGCGCATTCGCCGCTTTCCCGGCCATGCCGGATGGGGGTTGGCGGGG GCATGCGCTCAGGGCGCGGG
Product: ABC transporter related
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLELRALSFHRAGQPVLDGIDLRLGPGEFVGLLGPNGAGKTTLLRAALGLLPARGHSSLAALPVRERARAAAYMPQGREI AWPMPVEALVALGRIAHPHSASAADRAAIERAIAALHLDPLRHRRATELSGGEQARTLIARALAQETPLLIADEPIAGLD PAAQIDVMRLFRRLAGQGHAVLASLHDLGLAARHCTRLVMLHQGRIAADGPPEAVLTAQNLARVFGITAHVAPGPGGILF QPLDTIGGGAP
Sequences:
>Translated_251_residues MLELRALSFHRAGQPVLDGIDLRLGPGEFVGLLGPNGAGKTTLLRAALGLLPARGHSSLAALPVRERARAAAYMPQGREI AWPMPVEALVALGRIAHPHSASAADRAAIERAIAALHLDPLRHRRATELSGGEQARTLIARALAQETPLLIADEPIAGLD PAAQIDVMRLFRRLAGQGHAVLASLHDLGLAARHCTRLVMLHQGRIAADGPPEAVLTAQNLARVFGITAHVAPGPGGILF QPLDTIGGGAP >Mature_251_residues MLELRALSFHRAGQPVLDGIDLRLGPGEFVGLLGPNGAGKTTLLRAALGLLPARGHSSLAALPVRERARAAAYMPQGREI AWPMPVEALVALGRIAHPHSASAADRAAIERAIAALHLDPLRHRRATELSGGEQARTLIARALAQETPLLIADEPIAGLD PAAQIDVMRLFRRLAGQGHAVLASLHDLGLAARHCTRLVMLHQGRIAADGPPEAVLTAQNLARVFGITAHVAPGPGGILF QPLDTIGGGAP
Specific function: Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system [H]
COG id: COG1120
COG function: function code PH; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI46592898, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592915, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592964, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592978, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592956, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592971, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI150417984, Length=221, Percent_Identity=32.1266968325792, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI27436953, Length=188, Percent_Identity=29.2553191489362, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI27881501, Length=202, Percent_Identity=27.2277227722772, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI30795238, Length=202, Percent_Identity=27.2277227722772, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=242, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI215820660, Length=206, Percent_Identity=25.7281553398058, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI20143975, Length=206, Percent_Identity=25.7281553398058, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI105990541, Length=213, Percent_Identity=26.7605633802817, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1786345, Length=246, Percent_Identity=40.2439024390244, Blast_Score=144, Evalue=6e-36, Organism=Escherichia coli, GI1790739, Length=243, Percent_Identity=37.4485596707819, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1786803, Length=232, Percent_Identity=33.6206896551724, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1789593, Length=221, Percent_Identity=34.841628959276, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1787029, Length=244, Percent_Identity=31.9672131147541, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790544, Length=220, Percent_Identity=32.7272727272727, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788002, Length=225, Percent_Identity=33.7777777777778, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=36.231884057971, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=32.2314049586777, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=32.5991189427313, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=28.695652173913, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789890, Length=250, Percent_Identity=30.8, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=30.6306306306306, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=28.2511210762332, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788761, Length=208, Percent_Identity=32.2115384615385, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=30.8411214953271, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=31.9634703196347, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788165, Length=233, Percent_Identity=31.7596566523605, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=30.0411522633745, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=29.1479820627803, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788644, Length=88, Percent_Identity=42.0454545454545, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786253, Length=212, Percent_Identity=33.9622641509434, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=33.8235294117647, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI48994943, Length=222, Percent_Identity=28.8288288288288, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=29.9539170506912, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786872, Length=191, Percent_Identity=25.6544502617801, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=32.3809523809524, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787500, Length=202, Percent_Identity=31.6831683168317, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789864, Length=248, Percent_Identity=27.8225806451613, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787759, Length=215, Percent_Identity=30.2325581395349, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082268, Length=231, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787758, Length=209, Percent_Identity=28.2296650717703, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=29.1866028708134, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=215, Percent_Identity=31.6279069767442, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87082267, Length=224, Percent_Identity=29.9107142857143, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790162, Length=232, Percent_Identity=25.4310344827586, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787164, Length=215, Percent_Identity=31.6279069767442, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787105, Length=221, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI48994883, Length=216, Percent_Identity=26.8518518518519, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789991, Length=210, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786703, Length=205, Percent_Identity=29.7560975609756, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786398, Length=233, Percent_Identity=24.4635193133047, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787112, Length=230, Percent_Identity=27.8260869565217, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1790534, Length=193, Percent_Identity=31.0880829015544, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=26.3392857142857, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=23.7209302325581, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788210, Length=206, Percent_Identity=28.1553398058252, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533608, Length=207, Percent_Identity=31.4009661835749, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71983523, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983516, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983510, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17539902, Length=233, Percent_Identity=26.6094420600858, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=24.8927038626609, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17510237, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581191, Length=207, Percent_Identity=27.0531400966184, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24581189, Length=207, Percent_Identity=27.0531400966184, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24581193, Length=207, Percent_Identity=27.0531400966184, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24581195, Length=207, Percent_Identity=27.0531400966184, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI85724864, Length=179, Percent_Identity=27.9329608938547, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24580555, Length=179, Percent_Identity=27.9329608938547, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI85816269, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24580553, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI62484234, Length=207, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24666092, Length=222, Percent_Identity=29.2792792792793, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24662800, Length=213, Percent_Identity=25.3521126760563, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17136592, Length=208, Percent_Identity=29.8076923076923, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920532, Length=183, Percent_Identity=28.4153005464481, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580930, Length=183, Percent_Identity=28.4153005464481, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI85725262, Length=228, Percent_Identity=31.140350877193, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076682, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076684, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581617, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581615, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=244, Percent_Identity=23.7704918032787, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007184, Length=244, Percent_Identity=23.7704918032787, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552199, Length=245, Percent_Identity=28.1632653061224, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581407, Length=245, Percent_Identity=28.1632653061224, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581387, Length=185, Percent_Identity=29.1891891891892, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI28574150, Length=199, Percent_Identity=24.6231155778894, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI116007328, Length=199, Percent_Identity=24.6231155778894, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015863 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26237; Mature: 26237
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRALSFHRAGQPVLDGIDLRLGPGEFVGLLGPNGAGKTTLLRAALGLLPARGHSSLA CCEEEECHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE ALPVRERARAAAYMPQGREIAWPMPVEALVALGRIAHPHSASAADRAAIERAIAALHLDP ECCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LRHRRATELSGGEQARTLIARALAQETPLLIADEPIAGLDPAAQIDVMRLFRRLAGQGHA HHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH VLASLHDLGLAARHCTRLVMLHQGRIAADGPPEAVLTAQNLARVFGITAHVAPGPGGILF HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEE QPLDTIGGGAP CCHHHCCCCCC >Mature Secondary Structure MLELRALSFHRAGQPVLDGIDLRLGPGEFVGLLGPNGAGKTTLLRAALGLLPARGHSSLA CCEEEECHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE ALPVRERARAAAYMPQGREIAWPMPVEALVALGRIAHPHSASAADRAAIERAIAALHLDP ECCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LRHRRATELSGGEQARTLIARALAQETPLLIADEPIAGLDPAAQIDVMRLFRRLAGQGHA HHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH VLASLHDLGLAARHCTRLVMLHQGRIAADGPPEAVLTAQNLARVFGITAHVAPGPGGILF HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEE QPLDTIGGGAP CCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA