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The map label for this gene is nrdI

Identifier: 119387081

GI number: 119387081

Start: 1566910

End: 1567326

Strand: Direct

Name: nrdI

Synonym: Pden_4376

Alternate gene names: 119387081

Gene position: 1566910-1567326 (Clockwise)

Preceding gene: 119387080

Following gene: 119387082

Centisome position: 90.57

GC content: 66.19

Gene sequence:

>417_bases
ATGGGCGGGCTGGTCTATTTCTCCTCGGGCTCGGGGAACACGGCGCGTTTCGTGACGCGGCTCGGCCTGCCGGCCGGGCG
CATCCCGATCTCGCCCAGGGACGAGATGCCCGCCCCCGCCCTGCCCTATGTGCTGATCTGCCCGACCTATGCCGACGGGA
TGGGTCGGGGCGCGGTGCCCAAGCAGGTGATCCGCTTTCTCAACGATCCTGACCGCCGGGCCCTGCTGCGCGGCGTCATC
GCCACCGGCAACCGGAATTTCGGGGCGACATACGCCTTGGCCGGCCGGGTGATATCTGACAAGTGCAACGTCCCCGTGCT
GTATCGATTCGAGCTGGCGGGGACTGATCTGGACATTTCCCGCGTTCAGGCGGGGCTTGCGAAATTCTGGGGGACGGAAT
GCTTGACGATGGCGTAA

Upstream 100 bases:

>100_bases
CTCGCTGGGCTATCGCCAGGCTCCCGTCGTCATCGCCGGCGAAGCCCATTGGGCCGGGTTCCGCCCGGACATGATCGGCC
GCCTGTCCTGATCCGGGGCC

Downstream 100 bases:

>100_bases
AGGCCGAGCTGGACTATCACGCGCTGAATGCGATGCTGAACCTTTACGACGGCGAGGGCCGCATCCGCTTCGACGCGGAT
CGCAAGGCCGCGCGGCAGTA

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGGLVYFSSGSGNTARFVTRLGLPAGRIPISPRDEMPAPALPYVLICPTYADGMGRGAVPKQVIRFLNDPDRRALLRGVI
ATGNRNFGATYALAGRVISDKCNVPVLYRFELAGTDLDISRVQAGLAKFWGTECLTMA

Sequences:

>Translated_138_residues
MGGLVYFSSGSGNTARFVTRLGLPAGRIPISPRDEMPAPALPYVLICPTYADGMGRGAVPKQVIRFLNDPDRRALLRGVI
ATGNRNFGATYALAGRVISDKCNVPVLYRFELAGTDLDISRVQAGLAKFWGTECLTMA
>Mature_137_residues
GGLVYFSSGSGNTARFVTRLGLPAGRIPISPRDEMPAPALPYVLICPTYADGMGRGAVPKQVIRFLNDPDRRALLRGVIA
TGNRNFGATYALAGRVISDKCNVPVLYRFELAGTDLDISRVQAGLAKFWGTECLTMA

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=130, Percent_Identity=60.7692307692308, Blast_Score=158, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_PARDP (A1BA96)

Other databases:

- EMBL:   CP000490
- RefSeq:   YP_918136.1
- ProteinModelPortal:   A1BA96
- STRING:   A1BA96
- GeneID:   4582926
- GenomeReviews:   CP000490_GR
- KEGG:   pde:Pden_4376
- eggNOG:   COG1780
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- PhylomeDB:   A1BA96
- ProtClustDB:   PRK03600
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 14821; Mature: 14690

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLVYFSSGSGNTARFVTRLGLPAGRIPISPRDEMPAPALPYVLICPTYADGMGRGAVP
CCCEEEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCH
KQVIRFLNDPDRRALLRGVIATGNRNFGATYALAGRVISDKCNVPVLYRFELAGTDLDIS
HHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCEEEEEEECCCCCCHH
RVQAGLAKFWGTECLTMA
HHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
GGLVYFSSGSGNTARFVTRLGLPAGRIPISPRDEMPAPALPYVLICPTYADGMGRGAVP
CCEEEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCH
KQVIRFLNDPDRRALLRGVIATGNRNFGATYALAGRVISDKCNVPVLYRFELAGTDLDIS
HHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCEEEEEEECCCCCCHH
RVQAGLAKFWGTECLTMA
HHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA