Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is nrdH [H]

Identifier: 119387080

GI number: 119387080

Start: 1566679

End: 1566900

Strand: Direct

Name: nrdH [H]

Synonym: Pden_4375

Alternate gene names: 119387080

Gene position: 1566679-1566900 (Clockwise)

Preceding gene: 119387076

Following gene: 119387081

Centisome position: 90.55

GC content: 66.67

Gene sequence:

>222_bases
ATGACCATCACCGTTTATTCCAAGCCCGCCTGCGTGCAATGCACCGCCACGACCCGCGCCCTGGATGCGCGCGGCCTGGA
CTACCATCTGGTGGATCTGACCGAGGATGACGCGGCGATGGAACTGGTCGCCTCGCTGGGCTATCGCCAGGCTCCCGTCG
TCATCGCCGGCGAAGCCCATTGGGCCGGGTTCCGCCCGGACATGATCGGCCGCCTGTCCTGA

Upstream 100 bases:

>100_bases
AGGACGAAACCGTGCGGCGGGCGCGGGGCTGGAACAGGGTCCGGATGGCACGCCCATCGGCCCGGCCCCCTCTTGCCGAC
AGAACAAAAGGAGCCGAGGC

Downstream 100 bases:

>100_bases
TCCGGGGCCATGGGCGGGCTGGTCTATTTCTCCTCGGGCTCGGGGAACACGGCGCGTTTCGTGACGCGGCTCGGCCTGCC
GGCCGGGCGCATCCCGATCT

Product: glutaredoxin-like protein NrdH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTITVYSKPACVQCTATTRALDARGLDYHLVDLTEDDAAMELVASLGYRQAPVVIAGEAHWAGFRPDMIGRLS

Sequences:

>Translated_73_residues
MTITVYSKPACVQCTATTRALDARGLDYHLVDLTEDDAAMELVASLGYRQAPVVIAGEAHWAGFRPDMIGRLS
>Mature_72_residues
TITVYSKPACVQCTATTRALDARGLDYHLVDLTEDDAAMELVASLGYRQAPVVIAGEAHWAGFRPDMIGRLS

Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1789028, Length=72, Percent_Identity=50, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011909
- InterPro:   IPR002109
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 7911; Mature: 7780

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITVYSKPACVQCTATTRALDARGLDYHLVDLTEDDAAMELVASLGYRQAPVVIAGEAH
CEEEEECCCCEEEEECCCEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCC
WAGFRPDMIGRLS
CCCCCCCCCCCCC
>Mature Secondary Structure 
TITVYSKPACVQCTATTRALDARGLDYHLVDLTEDDAAMELVASLGYRQAPVVIAGEAH
EEEEECCCCEEEEECCCEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCC
WAGFRPDMIGRLS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]