Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is yeiH [C]

Identifier: 119387075

GI number: 119387075

Start: 1561546

End: 1562565

Strand: Direct

Name: yeiH [C]

Synonym: Pden_4370

Alternate gene names: 119387075

Gene position: 1561546-1562565 (Clockwise)

Preceding gene: 119387073

Following gene: 119387076

Centisome position: 90.26

GC content: 71.47

Gene sequence:

>1020_bases
ATGTCCTCGACCGACCAGGGCCAGCAAACATCTTCCGCGATCGGGGGCTGGCTGGGCGCCACCCTGCCGGGGCTGGGGCT
GACCTTCGGCATCGCGATCCTTGCCATGGCGGCGCAGAGGCTTTCGGGCATACCGGCGCTCAGCCCGCTGGTGGTGGCGA
TGGTGCTGGGCATGGCGCTGCGCAACCTTGTCGGCACACCCGCGGCGGCGCGGCCGGGCATCGGCTTTTCGCTGCGCCGG
GTGCTGCGTTTCGCCATCGTGCTGCTGGGCTTTCAGCTGACGCTGGAGCAATTGCGCGCCGTGGGCCTGCCGGGGGTGGC
GGTGATCGCGGTGGTGCTGGCCGCGACCTTCGTCTTTACCAGATGGGCCGGCCGGGCATTGGGGGTCGAGGCGCGGCTTG
CCGAGCTGATCGCGGCCGGCACCTCGGTCTGCGGCGCCTCGGCGGTGATCGCCACGAACACGGTCACGCGCGGGACGGAC
GAGGACGTGGCCTATGCCATCGCCTGCGTGACGGTCTTCGGCTCGCTCTCGATGCTGGCCATGCCGGTGCTGGGCGAGAT
GCTGGGGATGGGGCCTTCGCATTACGGCATCTGGGTCGGCGCGACCGTGCACGAGGTGGCGCAGGTCGTCGGCGCCGGCT
TCCAGCATGGCGCCGAGGCGGGACAGGCCGCGACCGTCGCCAAGCTGAGCCGGGTGATGCTGCTGGCTCCGCTGATCCTG
ATGCTGGGCGCGCTGGCGCGGCGGGGCGGCAAGGCCGCGCATGGCTCGGCGCCGACGCCCTGGTTCGTGCTGGGCTTCAT
CGCCGTGGTGCTGCTGAACAGCGCCCTGCCCCTGCCCGAGGCGCTGCATGCCGAGATCGTCGCCCTGACCGCCTTTCTCC
TGACGGTGGCGCTGGCCGCGATGGGGCTGGAGACCGACATCCGCAAGCTCTGCGCCAAGGGCGTCCGGCCGCTGGCGCTT
GGCGCGCTGGCCTGGCTGTTCATCTCGGCCCTGGGGCTGGAGCTGGTGGCGCTGATCTGA

Upstream 100 bases:

>100_bases
CAGACTCATAAGTAAAATCGAACGATATGGCAAATATAATGCGATGGATTGAACGTCGATTCAGGACCATGTTCCGCCCC
AAAGGCAAAGGAGCGCGACC

Downstream 100 bases:

>100_bases
CCGGCGGGCATTGAGCCTCCCTGTCGCGATGCCTAGATTGGGCACGATCCGCCAAAGGACCGCGCCCATGGCCCTTGCGC
CCGCCGACACCCGCCCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSSTDQGQQTSSAIGGWLGATLPGLGLTFGIAILAMAAQRLSGIPALSPLVVAMVLGMALRNLVGTPAAARPGIGFSLRR
VLRFAIVLLGFQLTLEQLRAVGLPGVAVIAVVLAATFVFTRWAGRALGVEARLAELIAAGTSVCGASAVIATNTVTRGTD
EDVAYAIACVTVFGSLSMLAMPVLGEMLGMGPSHYGIWVGATVHEVAQVVGAGFQHGAEAGQAATVAKLSRVMLLAPLIL
MLGALARRGGKAAHGSAPTPWFVLGFIAVVLLNSALPLPEALHAEIVALTAFLLTVALAAMGLETDIRKLCAKGVRPLAL
GALAWLFISALGLELVALI

Sequences:

>Translated_339_residues
MSSTDQGQQTSSAIGGWLGATLPGLGLTFGIAILAMAAQRLSGIPALSPLVVAMVLGMALRNLVGTPAAARPGIGFSLRR
VLRFAIVLLGFQLTLEQLRAVGLPGVAVIAVVLAATFVFTRWAGRALGVEARLAELIAAGTSVCGASAVIATNTVTRGTD
EDVAYAIACVTVFGSLSMLAMPVLGEMLGMGPSHYGIWVGATVHEVAQVVGAGFQHGAEAGQAATVAKLSRVMLLAPLIL
MLGALARRGGKAAHGSAPTPWFVLGFIAVVLLNSALPLPEALHAEIVALTAFLLTVALAAMGLETDIRKLCAKGVRPLAL
GALAWLFISALGLELVALI
>Mature_338_residues
SSTDQGQQTSSAIGGWLGATLPGLGLTFGIAILAMAAQRLSGIPALSPLVVAMVLGMALRNLVGTPAAARPGIGFSLRRV
LRFAIVLLGFQLTLEQLRAVGLPGVAVIAVVLAATFVFTRWAGRALGVEARLAELIAAGTSVCGASAVIATNTVTRGTDE
DVAYAIACVTVFGSLSMLAMPVLGEMLGMGPSHYGIWVGATVHEVAQVVGAGFQHGAEAGQAATVAKLSRVMLLAPLILM
LGALARRGGKAAHGSAPTPWFVLGFIAVVLLNSALPLPEALHAEIVALTAFLLTVALAAMGLETDIRKLCAKGVRPLALG
ALAWLFISALGLELVALI

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=322, Percent_Identity=36.0248447204969, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 34538; Mature: 34406

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTDQGQQTSSAIGGWLGATLPGLGLTFGIAILAMAAQRLSGIPALSPLVVAMVLGMAL
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RNLVGTPAAARPGIGFSLRRVLRFAIVLLGFQLTLEQLRAVGLPGVAVIAVVLAATFVFT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RWAGRALGVEARLAELIAAGTSVCGASAVIATNTVTRGTDEDVAYAIACVTVFGSLSMLA
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MPVLGEMLGMGPSHYGIWVGATVHEVAQVVGAGFQHGAEAGQAATVAKLSRVMLLAPLIL
HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
MLGALARRGGKAAHGSAPTPWFVLGFIAVVLLNSALPLPEALHAEIVALTAFLLTVALAA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGLETDIRKLCAKGVRPLALGALAWLFISALGLELVALI
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSTDQGQQTSSAIGGWLGATLPGLGLTFGIAILAMAAQRLSGIPALSPLVVAMVLGMAL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RNLVGTPAAARPGIGFSLRRVLRFAIVLLGFQLTLEQLRAVGLPGVAVIAVVLAATFVFT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RWAGRALGVEARLAELIAAGTSVCGASAVIATNTVTRGTDEDVAYAIACVTVFGSLSMLA
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MPVLGEMLGMGPSHYGIWVGATVHEVAQVVGAGFQHGAEAGQAATVAKLSRVMLLAPLIL
HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
MLGALARRGGKAAHGSAPTPWFVLGFIAVVLLNSALPLPEALHAEIVALTAFLLTVALAA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGLETDIRKLCAKGVRPLALGALAWLFISALGLELVALI
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA