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The map label for this gene is glxA [H]

Identifier: 119387070

GI number: 119387070

Start: 1554607

End: 1555581

Strand: Direct

Name: glxA [H]

Synonym: Pden_4365

Alternate gene names: 119387070

Gene position: 1554607-1555581 (Clockwise)

Preceding gene: 119387067

Following gene: 119387073

Centisome position: 89.86

GC content: 69.13

Gene sequence:

>975_bases
ATGCACCAGGTCGTCTTCGTCGTCTATCCGGGGTTCGAACTGCTCGACATGGCGGGGCCGGCATCCGTCCTCAACGGCGC
GAACCGCGCCTTGGGACAGGCGGGACAGGCACCGTTCTACGAGGTCGCGCTGACCTCGCCGGCCGGGGGCGAGATCGCCA
GCAGCAGCGGTGTTTCCATCCAGACTTCGCGCCTTGCCGGGTTTCGCGGATGCAGGATCGGAACGCTGCTGATCGTGGGC
GCCGAAAGCGGACCGCTGCAAGCCGCCATGGCGGACCCCGAATTGCGCCGGGTGCTTCCTGCATTGTCGGCAAAGGCCGG
CCGGTTCGGCTCGGTCTGCTCGGGCGGGATCGTGCTGGCAAGCCTCGGGCTGCTGGACGGCTGCCGGGTCGCGACGCATT
GGGATGCCTATGAGCCCTTCCGGGCGCATTTCCCGCGCGTGACCGTCGATCCCGAGGCGCTGTATGTCGAGGATGGCCGC
CTGTGGACCTCGGCCGGGGTCACCACCGGCATCGACATGGCGCTTGCCATGGTCGGGCGCGACCTGGACACGGCCATCGC
GGGCGAGGTGGCGCAGCGGCTGATCCTTTATGCCCGCCGGCCGGGCCATCAGTCGCAGTTCAGCCCGGTGCTGTCGGCGC
AGGCCAGGGGCGACAACCCCTTTGCCGATCTGATCGGGTGGATCCAGTCCAATCTCGGCGCCACGCTGGACGTGCCGGCG
CTGGCTGGCCGCGCCGGCCTGACCGAGCGCAGCTTTCACCGCAAGTTCGCCGCCGCGACCGGCAAGACTCCCGCCCATTT
CGTCGAAACCGTGCGGCTGGACGCGGCGCGCATGTTGCTGTCGCGAGGGCTGTCGATCAAGCAGGTCGCGGCGCAGGTGG
GCCTGTCTCCGGCCGCAAGGCTCTCGCGCCTGTTCGAGAAGCGCTTCGGCATCTCGCCCCGGACCTATCGCGAGATGCAC
CGCATCGAGGGCTAG

Upstream 100 bases:

>100_bases
GGCTGCCGGGTCGGGCATGCGCTTGCAAGGGATGCCCGTCGGTTCAGACTAGCCCGCCGCAACGATAGCAGGAATGACAG
AAACATGCTAATTCCTGCCA

Downstream 100 bases:

>100_bases
CGCCGGCCGAGCGCGAGACCGGAAGCACGGCGCGCCGGCAGAACCGCCCTTCGCCGTTCCGATGCCGGGCGTGATCAGGC
AGGGGGAGAATTCGGCCGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MHQVVFVVYPGFELLDMAGPASVLNGANRALGQAGQAPFYEVALTSPAGGEIASSSGVSIQTSRLAGFRGCRIGTLLIVG
AESGPLQAAMADPELRRVLPALSAKAGRFGSVCSGGIVLASLGLLDGCRVATHWDAYEPFRAHFPRVTVDPEALYVEDGR
LWTSAGVTTGIDMALAMVGRDLDTAIAGEVAQRLILYARRPGHQSQFSPVLSAQARGDNPFADLIGWIQSNLGATLDVPA
LAGRAGLTERSFHRKFAAATGKTPAHFVETVRLDAARMLLSRGLSIKQVAAQVGLSPAARLSRLFEKRFGISPRTYREMH
RIEG

Sequences:

>Translated_324_residues
MHQVVFVVYPGFELLDMAGPASVLNGANRALGQAGQAPFYEVALTSPAGGEIASSSGVSIQTSRLAGFRGCRIGTLLIVG
AESGPLQAAMADPELRRVLPALSAKAGRFGSVCSGGIVLASLGLLDGCRVATHWDAYEPFRAHFPRVTVDPEALYVEDGR
LWTSAGVTTGIDMALAMVGRDLDTAIAGEVAQRLILYARRPGHQSQFSPVLSAQARGDNPFADLIGWIQSNLGATLDVPA
LAGRAGLTERSFHRKFAAATGKTPAHFVETVRLDAARMLLSRGLSIKQVAAQVGLSPAARLSRLFEKRFGISPRTYREMH
RIEG
>Mature_324_residues
MHQVVFVVYPGFELLDMAGPASVLNGANRALGQAGQAPFYEVALTSPAGGEIASSSGVSIQTSRLAGFRGCRIGTLLIVG
AESGPLQAAMADPELRRVLPALSAKAGRFGSVCSGGIVLASLGLLDGCRVATHWDAYEPFRAHFPRVTVDPEALYVEDGR
LWTSAGVTTGIDMALAMVGRDLDTAIAGEVAQRLILYARRPGHQSQFSPVLSAQARGDNPFADLIGWIQSNLGATLDVPA
LAGRAGLTERSFHRKFAAATGKTPAHFVETVRLDAARMLLSRGLSIKQVAAQVGLSPAARLSRLFEKRFGISPRTYREMH
RIEG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34364; Mature: 34364

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQVVFVVYPGFELLDMAGPASVLNGANRALGQAGQAPFYEVALTSPAGGEIASSSGVSI
CCEEEEEEECCHHHHHCCCCHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEE
QTSRLAGFRGCRIGTLLIVGAESGPLQAAMADPELRRVLPALSAKAGRFGSVCSGGIVLA
EHHHHCCCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHCCCHHHH
SLGLLDGCRVATHWDAYEPFRAHFPRVTVDPEALYVEDGRLWTSAGVTTGIDMALAMVGR
HHHHHCCCEEEECCCCCCHHHHHCCEEEECCCEEEEECCCEEECCCCHHHHHHHHHHHCC
DLDTAIAGEVAQRLILYARRPGHQSQFSPVLSAQARGDNPFADLIGWIQSNLGATLDVPA
CHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCEECCHH
LAGRAGLTERSFHRKFAAATGKTPAHFVETVRLDAARMLLSRGLSIKQVAAQVGLSPAAR
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
LSRLFEKRFGISPRTYREMHRIEG
HHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MHQVVFVVYPGFELLDMAGPASVLNGANRALGQAGQAPFYEVALTSPAGGEIASSSGVSI
CCEEEEEEECCHHHHHCCCCHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEE
QTSRLAGFRGCRIGTLLIVGAESGPLQAAMADPELRRVLPALSAKAGRFGSVCSGGIVLA
EHHHHCCCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHCCCHHHH
SLGLLDGCRVATHWDAYEPFRAHFPRVTVDPEALYVEDGRLWTSAGVTTGIDMALAMVGR
HHHHHCCCEEEECCCCCCHHHHHCCEEEECCCEEEEECCCEEECCCCHHHHHHHHHHHCC
DLDTAIAGEVAQRLILYARRPGHQSQFSPVLSAQARGDNPFADLIGWIQSNLGATLDVPA
CHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCEECCHH
LAGRAGLTERSFHRKFAAATGKTPAHFVETVRLDAARMLLSRGLSIKQVAAQVGLSPAAR
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
LSRLFEKRFGISPRTYREMHRIEG
HHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]