| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119387062
Identifier: 119387062
GI number: 119387062
Start: 1545866
End: 1546603
Strand: Direct
Name: 119387062
Synonym: Pden_4357
Alternate gene names: NA
Gene position: 1545866-1546603 (Clockwise)
Preceding gene: 119387060
Following gene: 119387063
Centisome position: 89.35
GC content: 73.58
Gene sequence:
>738_bases ATGCCCGACCCCGATCATGGCCCGCTTGCGCAGCCCCCTCGTCCGGCGGCTGGAATACCGGCGCAGGTTGCCGCCAGCGC CGCGATGGGCGTCCTGTCGATGCAGGCGCTGCGCCTGGCCGGAATGGGCGGCACGGCGGGAGGATGGCTTGCCGCCAGCG CGCTTTACCTGGCCTGCTGCGCCATGATCCTGGCGCAGATGCGGCGCAGCTATCCGCATGACCGGATCGGCGGTTGCAAT GCGGTGACGCTGCTGCGCGCGGCCGTCACCTGCGCCCTGCTGGCGCCGCTTGCGGATGGCGCGGCGGCGGGATGGGCCGT CGCGATGGCCGGGCTGGTGGCGCTGGCGCTCGACGGGGTGGACGGCTGGCTGGCGCGGCGGTCGGGCCTCGTCTCGGGCT TCGGGGCGCGTTTCGACATGGAGGTCGACGCGGCCTTCGCCCTGACCCTGGCGCTGCATACCTGGCTGGGCACCACGCTG GGACCGGAGGTGCTGCTGCTGGGGGTGTTGCGCTACGGCTTCGTCGCCGCCGGCACCGCCCTGCCCTGGCTGCGGGCCGA TCTGCCGCAGCGCCTGCGGCGCAAGGCGATCTGCGTGCTGCAACTCGCCACGCTGCTCCTGCTGCAAACGCCGCTGCCCA GCCATGCGCAGGCCGGGTTCCTGGCCTGGCTCGCCACGGCGGCGCTGGCGCTGTCCTTCGCACTCGACATCCGCTGGCTG TGGCGGCACCGGCCATGA
Upstream 100 bases:
>100_bases TGGCTCCTTTCCGCCATCCTATCGCAAAACCCCGCCCCGCGCAAAGCAATGGCGCGGACATGACGCTTGACGGGGGCGAG GCTTGGCGTAGCATTTTCCC
Downstream 100 bases:
>100_bases CGATGCGCCGGACGCTGCCGCTTCTGGGCTCGGCGCTGGCGATCCAGCTGGCGCTGATGCTGCCCGGCGCCCCGATGCGC GCGACACCGGAGTTGCCGGC
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPDPDHGPLAQPPRPAAGIPAQVAASAAMGVLSMQALRLAGMGGTAGGWLAASALYLACCAMILAQMRRSYPHDRIGGCN AVTLLRAAVTCALLAPLADGAAAGWAVAMAGLVALALDGVDGWLARRSGLVSGFGARFDMEVDAAFALTLALHTWLGTTL GPEVLLLGVLRYGFVAAGTALPWLRADLPQRLRRKAICVLQLATLLLLQTPLPSHAQAGFLAWLATAALALSFALDIRWL WRHRP
Sequences:
>Translated_245_residues MPDPDHGPLAQPPRPAAGIPAQVAASAAMGVLSMQALRLAGMGGTAGGWLAASALYLACCAMILAQMRRSYPHDRIGGCN AVTLLRAAVTCALLAPLADGAAAGWAVAMAGLVALALDGVDGWLARRSGLVSGFGARFDMEVDAAFALTLALHTWLGTTL GPEVLLLGVLRYGFVAAGTALPWLRADLPQRLRRKAICVLQLATLLLLQTPLPSHAQAGFLAWLATAALALSFALDIRWL WRHRP >Mature_244_residues PDPDHGPLAQPPRPAAGIPAQVAASAAMGVLSMQALRLAGMGGTAGGWLAASALYLACCAMILAQMRRSYPHDRIGGCNA VTLLRAAVTCALLAPLADGAAAGWAVAMAGLVALALDGVDGWLARRSGLVSGFGARFDMEVDAAFALTLALHTWLGTTLG PEVLLLGVLRYGFVAAGTALPWLRADLPQRLRRKAICVLQLATLLLLQTPLPSHAQAGFLAWLATAALALSFALDIRWLW RHRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25556; Mature: 25425
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPDHGPLAQPPRPAAGIPAQVAASAAMGVLSMQALRLAGMGGTAGGWLAASALYLACC CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMILAQMRRSYPHDRIGGCNAVTLLRAAVTCALLAPLADGAAAGWAVAMAGLVALALDGV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC DGWLARRSGLVSGFGARFDMEVDAAFALTLALHTWLGTTLGPEVLLLGVLRYGFVAAGTA HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LPWLRADLPQRLRRKAICVLQLATLLLLQTPLPSHAQAGFLAWLATAALALSFALDIRWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WRHRP HCCCC >Mature Secondary Structure PDPDHGPLAQPPRPAAGIPAQVAASAAMGVLSMQALRLAGMGGTAGGWLAASALYLACC CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMILAQMRRSYPHDRIGGCNAVTLLRAAVTCALLAPLADGAAAGWAVAMAGLVALALDGV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC DGWLARRSGLVSGFGARFDMEVDAAFALTLALHTWLGTTLGPEVLLLGVLRYGFVAAGTA HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LPWLRADLPQRLRRKAICVLQLATLLLLQTPLPSHAQAGFLAWLATAALALSFALDIRWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WRHRP HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA