Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119386771

Identifier: 119386771

GI number: 119386771

Start: 1218643

End: 1218984

Strand: Direct

Name: 119386771

Synonym: Pden_4064

Alternate gene names: NA

Gene position: 1218643-1218984 (Clockwise)

Preceding gene: 119386767

Following gene: 119386778

Centisome position: 70.44

GC content: 67.25

Gene sequence:

>342_bases
ATGAGCCGCGAACTGGTCAACGAGATCTGCGCCGCACAGCCCGGGGCCGAGTGGTCGGATCCCTGGGGCGGCGGCCATGA
TTGCTGGAAGATCGGCGGCAAGACCTTTGCCGTCACGGGCGCCGTCGGCACGCATGTCTCGGTCAAGACCGACAGCGTCG
AGATGGCCGAATTCCTGATCGAGACCGGCGTGGCCGAACGCGCGGCCTATCTGCATCGCAGCTGGGTCGCGCTGCCGCTC
GATTCGGCACCGGACGAACTGGCGCATCGCATCCGCCATTCCTATCGCCTGGTGCGCGGCGCCCTGCCGAAGAAGGTGCA
GGCCACCCTGCCGTCCTTGTGA

Upstream 100 bases:

>100_bases
AGCCGGTAATGATGCAGCGGATGGTGGCGGTTCCTGCCTTCATGCGCCCGCCTTAACGCATTGTCTTGCCTATGCCAAGA
GAGGCTGCAAAACTCCGCCC

Downstream 100 bases:

>100_bases
CGAAAATGGCCGGCCCCCGAAGGAGCCGGCCAGAGGCGAAGGGCCGAGCGACTGGCCCCGCGCCAGGAACGATCAGCAAA
GCGTCAGGCCGGAACCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSRELVNEICAAQPGAEWSDPWGGGHDCWKIGGKTFAVTGAVGTHVSVKTDSVEMAEFLIETGVAERAAYLHRSWVALPL
DSAPDELAHRIRHSYRLVRGALPKKVQATLPSL

Sequences:

>Translated_113_residues
MSRELVNEICAAQPGAEWSDPWGGGHDCWKIGGKTFAVTGAVGTHVSVKTDSVEMAEFLIETGVAERAAYLHRSWVALPL
DSAPDELAHRIRHSYRLVRGALPKKVQATLPSL
>Mature_112_residues
SRELVNEICAAQPGAEWSDPWGGGHDCWKIGGKTFAVTGAVGTHVSVKTDSVEMAEFLIETGVAERAAYLHRSWVALPLD
SAPDELAHRIRHSYRLVRGALPKKVQATLPSL

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12278; Mature: 12147

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRELVNEICAAQPGAEWSDPWGGGHDCWKIGGKTFAVTGAVGTHVSVKTDSVEMAEFLI
CCHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCEEEEEECCCCCEEEECCCHHHHHHHHH
ETGVAERAAYLHRSWVALPLDSAPDELAHRIRHSYRLVRGALPKKVQATLPSL
HHCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure 
SRELVNEICAAQPGAEWSDPWGGGHDCWKIGGKTFAVTGAVGTHVSVKTDSVEMAEFLI
CHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCEEEEEECCCCCEEEECCCHHHHHHHHH
ETGVAERAAYLHRSWVALPLDSAPDELAHRIRHSYRLVRGALPKKVQATLPSL
HHCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA