| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386683
Identifier: 119386683
GI number: 119386683
Start: 1114911
End: 1115441
Strand: Direct
Name: 119386683
Synonym: Pden_3976
Alternate gene names: NA
Gene position: 1114911-1115441 (Clockwise)
Preceding gene: 119386682
Following gene: 119386684
Centisome position: 64.44
GC content: 68.93
Gene sequence:
>531_bases ATGGGGCTGATGGACCGCTTTCTGGGTGCCGGCGCCGCCGTCACCACCGTCGCCCATGCCGCGACCGGCATGGCCGAGCT GTTGCGCGAGAACGCGACGCGGCGCATGGAACTGGACGAAGAGGCCCATGCCCGCGCCATCGCCCAGCTTTCCAGCGAGT TCGCCGCCCGGCCATGCGGCTGGTTCGACGGCATGATGAACGGGCTGAACCGCCTGCCGCGTCCGCTGATGACGTTGGGG ACGGTGGGGCTGTTCGCCTATGCCATGGCCGACCCCGAGGGCTTCGGGTTGCGGATGCAGAACCTGGACCTCGTGCCCGA GCCGCTCTGGTGGCTGCTGGGCGCCATCATCAGCTTTTATTTCGGCGCGCGCGAGGCGCATTACTTTCGCCGCCGACCCA TTCCACCCGGCCCCTCGCGGATCGCGGAAGCGGATCCCGGGCAAGCGGCACCCTTCGCGCCGATGACGGCAGAACCCTTC GAGGACAACGCCGCCTTGCGGGATTGGGCTGCGGCAAAGGCTGCGCGCTAG
Upstream 100 bases:
>100_bases CGCAATCGGGGGGCAAGGGCGGCTGGATCCTGCGGGCCGAGGAGTTCATCTCGGCCAGATATCACCTCACGTTGGCCGAG CACCGGGCAAGGGTGGCGAA
Downstream 100 bases:
>100_bases CAATGCTGTGACAATCTGGCAGGCGCGGGGGGCTGGCTTGCCGCCCGCGCCGCGGTTATCCTGCGGGGCAGCCACCCGGA GGGAGCCCATGATCGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGLMDRFLGAGAAVTTVAHAATGMAELLRENATRRMELDEEAHARAIAQLSSEFAARPCGWFDGMMNGLNRLPRPLMTLG TVGLFAYAMADPEGFGLRMQNLDLVPEPLWWLLGAIISFYFGAREAHYFRRRPIPPGPSRIAEADPGQAAPFAPMTAEPF EDNAALRDWAAAKAAR
Sequences:
>Translated_176_residues MGLMDRFLGAGAAVTTVAHAATGMAELLRENATRRMELDEEAHARAIAQLSSEFAARPCGWFDGMMNGLNRLPRPLMTLG TVGLFAYAMADPEGFGLRMQNLDLVPEPLWWLLGAIISFYFGAREAHYFRRRPIPPGPSRIAEADPGQAAPFAPMTAEPF EDNAALRDWAAAKAAR >Mature_175_residues GLMDRFLGAGAAVTTVAHAATGMAELLRENATRRMELDEEAHARAIAQLSSEFAARPCGWFDGMMNGLNRLPRPLMTLGT VGLFAYAMADPEGFGLRMQNLDLVPEPLWWLLGAIISFYFGAREAHYFRRRPIPPGPSRIAEADPGQAAPFAPMTAEPFE DNAALRDWAAAKAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19219; Mature: 19088
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLMDRFLGAGAAVTTVAHAATGMAELLRENATRRMELDEEAHARAIAQLSSEFAARPCG CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH WFDGMMNGLNRLPRPLMTLGTVGLFAYAMADPEGFGLRMQNLDLVPEPLWWLLGAIISFY HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH FGAREAHYFRRRPIPPGPSRIAEADPGQAAPFAPMTAEPFEDNAALRDWAAAKAAR HCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure GLMDRFLGAGAAVTTVAHAATGMAELLRENATRRMELDEEAHARAIAQLSSEFAARPCG CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH WFDGMMNGLNRLPRPLMTLGTVGLFAYAMADPEGFGLRMQNLDLVPEPLWWLLGAIISFY HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH FGAREAHYFRRRPIPPGPSRIAEADPGQAAPFAPMTAEPFEDNAALRDWAAAKAAR HCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA