Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386612

Identifier: 119386612

GI number: 119386612

Start: 1039895

End: 1041997

Strand: Direct

Name: 119386612

Synonym: Pden_3905

Alternate gene names: NA

Gene position: 1039895-1041997 (Clockwise)

Preceding gene: 119386611

Following gene: 119386613

Centisome position: 60.11

GC content: 72.04

Gene sequence:

>2103_bases
ATGAGCGGCCTGACCTTCGATCCGCTGCTGTCCTGGCCGCTGGTCGGCGCCCTGGCCTTGCTCGGCGTGCTGGTGGCGCT
GTGGTCGCTGTGGCGCGGCTTGCGCGGCTGGGCTTGGCGCGGCATCGCCGGGCTGGCCGCGGCGGCGGCCCTTGCCGGGC
CTGCGCTGGAATCGGGCATCCGCCACAAGCTGTCGGATATCGTGATCCTGCTCGACGACCGCAGCGCCAGCCAGTCCCTG
CCGGGGCGGGCGGAGCAAACCGATGCCGCGGTCGAGGAACTGACCCGCCAGCTCTCCGCATTGCCCGATACCGAGATTCG
CCGCGTGACCGTTGCCGACGACCCGGACGGCACCCAGATCGGCACGGCGCTGACCCGGGCGCTGGCCGCCGAGCCGCAGG
CCCGCGTCGCAGGCGTCATCGCCGTGACCGACGGGCTGGCCCATGATGCGCCGATGCTGCCCGCCTCGGCGCCCGCGCCG
GTGCATGTGCTGCTGACCGGGCAGGCGCAGGACTGGGACCGCCGGCTGGTGATCGAGGAGGCCCCGGCCTATGGGCTGAT
CGGCAAGCCCGTCACCATCCGCCTGCGCGTCGAGGATCAGGGCGCCGTCCCCGCGCAGGTGGCGCAGACCCCCGCCCGGC
TTCGCATCCTGCTGGACGGAGAGGAGATGCGCAGCCTGGACCTGCCGCCGGGGGTGACGCTGGACCTGCCGGTGGTGCCG
GAACATGCCGGGCAGAACGTGGTCTCGATCGGGTTCGACGCGCCTCAGGCCGAGGTGCCGGAACTGACCGACCGCAACAA
CTCGGCCGCCGTGCAGATCCAGGGCGTGCGCGACCGGCTGCGGGTGCTGCTGGTCTCGGGCGCGCCGCACGCGGGCGAAA
GAACCTGGCGCAACCTGTTGAAATCGGATGCAAACGTGGACCTGATCCACTTCACCATCCTGCGGCCGCCGGACAAGATG
GATGCGGTTCCCGTCGATGAGATGTCGCTGATCGCCTTTCCGACCCAGGAACTGTTCATGGAGCGGATCCGGGATTTCGA
CCTGATCATCTTCGACCGCTACCGGGTGCGCGGCATCCTGCTGCCGCAATATTACGACAACATCCGGCGCTATGTCGAAG
AGGGCGGCGCGATCCTGGTCTCGGCGGGGCCCGAGATGTCCACGGTGGAAAGCCTGAACCTGTCGCCCCTGGGGGCGATC
CTGCCCGCGCGGCCCACCGGCCGGGTCTATGCCGAGCCCTTCCTGCCGCGCCTGACCGAGGACGGCGAGCGTCATCCGGT
CACCGCAGGTCTGCCCGGCGCCCCGGCAGAGGATGCGGCAAGCCATTGGGGCCGCTGGCTGCGCATGTCGCAGGTGATCC
CCGATCCCGATGCCCAGGTGGTGCTGAGCGGCGCGCGCGACGAGCCGCTTTTGCTGTTCAGCCGCGTGGGCGAGGGGCGG
GTGGCGATGCTGACCTCGGACCAGGTCTGGCTCTGGGGTCGCGGCTTCGAGGGCGGCGGGCCGCAGCTGGAACTGCTGCG
CCGCATCGCGCATTGGTCGATGCAGGAGCCCGAACTTGAGGAAGAGGCGCTGCTGGCCGATGTCAGCGGCGAACTGGCGG
TCACGATCACCCGCCGCACGATGAAGGTGACCGCCGGCCCGGTGCGCATCACGCGCCCCGATGGCCAGACCGAGGAGGTC
GCGCTGACCGAAGCCGGGCCGGGCCGCTTCACCGCACGCTGGACGGCGCCCGGGCCGGGGCTCTACCGGCTGGAAGAGGG
CGATATCGGCCGCGTGCTGGCGCTCGGCCCCGCGGCGCCGCGCGAATTCGAGCAGACCGTCGCCTCGGGCGCCGTGCTGG
GTCCGCTGGCCGAGGCAACGCAGGGCGCGGTGCTGCGGCTTTCCGAAGGCATGCCCGGCCTGCGCACCGTGCGCGAGGGA
CGGCCGGCGCATGGCCAGGGTGTCGGCGGGCCGTGGATCGCCATCACCCCGCGCGAGGCGGCCTCGGTCAGCGGCATGAC
GCATCGTCCGCTGCTGCCGGGTTGGGCCTGGCTCGCGCTGATCGCCGGGCTGGCGGTGGCGGGCTGGCTGGCCGAGGGCC
GCGGTCGGCTGCGCAGCACCTGA

Upstream 100 bases:

>100_bases
GCGTCAACCTGATCATGTATGTGCTGACCGGGAACTACAAATCCGACCAGGTGCATGTGCCGGCCCTGCTGGAGCGGCTG
CGGCAGGAGGAGGTCGTGCA

Downstream 100 bases:

>100_bases
CACGGCGAAACTTGCCAAGTCCGCGCCCCGTTGCTAGGCAAATGAAAACATTCCAAGAGGACCGCATGGCCGCCGCCCCC
AACGATGACCAGACCGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MSGLTFDPLLSWPLVGALALLGVLVALWSLWRGLRGWAWRGIAGLAAAAALAGPALESGIRHKLSDIVILLDDRSASQSL
PGRAEQTDAAVEELTRQLSALPDTEIRRVTVADDPDGTQIGTALTRALAAEPQARVAGVIAVTDGLAHDAPMLPASAPAP
VHVLLTGQAQDWDRRLVIEEAPAYGLIGKPVTIRLRVEDQGAVPAQVAQTPARLRILLDGEEMRSLDLPPGVTLDLPVVP
EHAGQNVVSIGFDAPQAEVPELTDRNNSAAVQIQGVRDRLRVLLVSGAPHAGERTWRNLLKSDANVDLIHFTILRPPDKM
DAVPVDEMSLIAFPTQELFMERIRDFDLIIFDRYRVRGILLPQYYDNIRRYVEEGGAILVSAGPEMSTVESLNLSPLGAI
LPARPTGRVYAEPFLPRLTEDGERHPVTAGLPGAPAEDAASHWGRWLRMSQVIPDPDAQVVLSGARDEPLLLFSRVGEGR
VAMLTSDQVWLWGRGFEGGGPQLELLRRIAHWSMQEPELEEEALLADVSGELAVTITRRTMKVTAGPVRITRPDGQTEEV
ALTEAGPGRFTARWTAPGPGLYRLEEGDIGRVLALGPAAPREFEQTVASGAVLGPLAEATQGAVLRLSEGMPGLRTVREG
RPAHGQGVGGPWIAITPREAASVSGMTHRPLLPGWAWLALIAGLAVAGWLAEGRGRLRST

Sequences:

>Translated_700_residues
MSGLTFDPLLSWPLVGALALLGVLVALWSLWRGLRGWAWRGIAGLAAAAALAGPALESGIRHKLSDIVILLDDRSASQSL
PGRAEQTDAAVEELTRQLSALPDTEIRRVTVADDPDGTQIGTALTRALAAEPQARVAGVIAVTDGLAHDAPMLPASAPAP
VHVLLTGQAQDWDRRLVIEEAPAYGLIGKPVTIRLRVEDQGAVPAQVAQTPARLRILLDGEEMRSLDLPPGVTLDLPVVP
EHAGQNVVSIGFDAPQAEVPELTDRNNSAAVQIQGVRDRLRVLLVSGAPHAGERTWRNLLKSDANVDLIHFTILRPPDKM
DAVPVDEMSLIAFPTQELFMERIRDFDLIIFDRYRVRGILLPQYYDNIRRYVEEGGAILVSAGPEMSTVESLNLSPLGAI
LPARPTGRVYAEPFLPRLTEDGERHPVTAGLPGAPAEDAASHWGRWLRMSQVIPDPDAQVVLSGARDEPLLLFSRVGEGR
VAMLTSDQVWLWGRGFEGGGPQLELLRRIAHWSMQEPELEEEALLADVSGELAVTITRRTMKVTAGPVRITRPDGQTEEV
ALTEAGPGRFTARWTAPGPGLYRLEEGDIGRVLALGPAAPREFEQTVASGAVLGPLAEATQGAVLRLSEGMPGLRTVREG
RPAHGQGVGGPWIAITPREAASVSGMTHRPLLPGWAWLALIAGLAVAGWLAEGRGRLRST
>Mature_699_residues
SGLTFDPLLSWPLVGALALLGVLVALWSLWRGLRGWAWRGIAGLAAAAALAGPALESGIRHKLSDIVILLDDRSASQSLP
GRAEQTDAAVEELTRQLSALPDTEIRRVTVADDPDGTQIGTALTRALAAEPQARVAGVIAVTDGLAHDAPMLPASAPAPV
HVLLTGQAQDWDRRLVIEEAPAYGLIGKPVTIRLRVEDQGAVPAQVAQTPARLRILLDGEEMRSLDLPPGVTLDLPVVPE
HAGQNVVSIGFDAPQAEVPELTDRNNSAAVQIQGVRDRLRVLLVSGAPHAGERTWRNLLKSDANVDLIHFTILRPPDKMD
AVPVDEMSLIAFPTQELFMERIRDFDLIIFDRYRVRGILLPQYYDNIRRYVEEGGAILVSAGPEMSTVESLNLSPLGAIL
PARPTGRVYAEPFLPRLTEDGERHPVTAGLPGAPAEDAASHWGRWLRMSQVIPDPDAQVVLSGARDEPLLLFSRVGEGRV
AMLTSDQVWLWGRGFEGGGPQLELLRRIAHWSMQEPELEEEALLADVSGELAVTITRRTMKVTAGPVRITRPDGQTEEVA
LTEAGPGRFTARWTAPGPGLYRLEEGDIGRVLALGPAAPREFEQTVASGAVLGPLAEATQGAVLRLSEGMPGLRTVREGR
PAHGQGVGGPWIAITPREAASVSGMTHRPLLPGWAWLALIAGLAVAGWLAEGRGRLRST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75225; Mature: 75094

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLTFDPLLSWPLVGALALLGVLVALWSLWRGLRGWAWRGIAGLAAAAALAGPALESGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RHKLSDIVILLDDRSASQSLPGRAEQTDAAVEELTRQLSALPDTEIRRVTVADDPDGTQI
HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
GTALTRALAAEPQARVAGVIAVTDGLAHDAPMLPASAPAPVHVLLTGQAQDWDRRLVIEE
HHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
APAYGLIGKPVTIRLRVEDQGAVPAQVAQTPARLRILLDGEEMRSLDLPPGVTLDLPVVP
CCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEECCHHHHCCCCCCCCEEECCCCC
EHAGQNVVSIGFDAPQAEVPELTDRNNSAAVQIQGVRDRLRVLLVSGAPHAGERTWRNLL
CCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEEEECCCCCCHHHHHHHH
KSDANVDLIHFTILRPPDKMDAVPVDEMSLIAFPTQELFMERIRDFDLIIFDRYRVRGIL
HCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECEEEEEEE
LPQYYDNIRRYVEEGGAILVSAGPEMSTVESLNLSPLGAILPARPTGRVYAEPFLPRLTE
CHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHCC
DGERHPVTAGLPGAPAEDAASHWGRWLRMSQVIPDPDAQVVLSGARDEPLLLFSRVGEGR
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCE
VAMLTSDQVWLWGRGFEGGGPQLELLRRIAHWSMQEPELEEEALLADVSGELAVTITRRT
EEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCCEEEEEEEEE
MKVTAGPVRITRPDGQTEEVALTEAGPGRFTARWTAPGPGLYRLEEGDIGRVLALGPAAP
EEEECCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCC
REFEQTVASGAVLGPLAEATQGAVLRLSEGMPGLRTVREGRPAHGQGVGGPWIAITPREA
HHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEECCCHH
ASVSGMTHRPLLPGWAWLALIAGLAVAGWLAEGRGRLRST
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGLTFDPLLSWPLVGALALLGVLVALWSLWRGLRGWAWRGIAGLAAAAALAGPALESGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RHKLSDIVILLDDRSASQSLPGRAEQTDAAVEELTRQLSALPDTEIRRVTVADDPDGTQI
HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
GTALTRALAAEPQARVAGVIAVTDGLAHDAPMLPASAPAPVHVLLTGQAQDWDRRLVIEE
HHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
APAYGLIGKPVTIRLRVEDQGAVPAQVAQTPARLRILLDGEEMRSLDLPPGVTLDLPVVP
CCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEECCHHHHCCCCCCCCEEECCCCC
EHAGQNVVSIGFDAPQAEVPELTDRNNSAAVQIQGVRDRLRVLLVSGAPHAGERTWRNLL
CCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEEEECCCCCCHHHHHHHH
KSDANVDLIHFTILRPPDKMDAVPVDEMSLIAFPTQELFMERIRDFDLIIFDRYRVRGIL
HCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECEEEEEEE
LPQYYDNIRRYVEEGGAILVSAGPEMSTVESLNLSPLGAILPARPTGRVYAEPFLPRLTE
CHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHCC
DGERHPVTAGLPGAPAEDAASHWGRWLRMSQVIPDPDAQVVLSGARDEPLLLFSRVGEGR
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCE
VAMLTSDQVWLWGRGFEGGGPQLELLRRIAHWSMQEPELEEEALLADVSGELAVTITRRT
EEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCCEEEEEEEEE
MKVTAGPVRITRPDGQTEEVALTEAGPGRFTARWTAPGPGLYRLEEGDIGRVLALGPAAP
EEEECCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCC
REFEQTVASGAVLGPLAEATQGAVLRLSEGMPGLRTVREGRPAHGQGVGGPWIAITPREA
HHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEECCCHH
ASVSGMTHRPLLPGWAWLALIAGLAVAGWLAEGRGRLRST
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA