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The map label for this gene is 119386563

Identifier: 119386563

GI number: 119386563

Start: 988892

End: 989887

Strand: Direct

Name: 119386563

Synonym: Pden_3856

Alternate gene names: NA

Gene position: 988892-989887 (Clockwise)

Preceding gene: 119386561

Following gene: 119386564

Centisome position: 57.16

GC content: 64.56

Gene sequence:

>996_bases
ATGGGCAAATTTCTTGCTTCGACTACGCTTGCCTTCATGGCACTGGCCGTCCCCGCATTCGCCGCTGACGAGGAATGCGG
CAGCATCACCGTGGCAGAGATGAACTGGGCCTCGGCGGGGCTGGCGGCGTGGGTCGACAAGATCATCCTCGAAGAGGGCT
ATGGCTGCGACGTGGCGCTGGTCTCGGGCGATACGATGCCGACTTTCGCGTCGATGAACGAAAAGGCCCAGCCGGACATG
GCCCCCGAGTTGTGGGTCAACGCGGTCAAGGAGCCGCTGGACCAGGCGGTCGCGGAAGGGCGGATCGTGATCGCCTCGCA
GATCCTGTCCGATGGCGGGGTCGAGGGCATCTGGGTGCCGACATGGCTGGCCGAAGAGCACAACATCCACACGCTCAAGG
ACGCGCTGGAACATCCAGAACTGTTCCCCGGCGCCGAGGACAGCAGCAAGGGCGCCTGGTTCGGCTGTCCCTCGGGCTGG
GCCTGCCAGGCGATCAACCGCAACCAGTTCGTCGGCTCGGGCGCTGCGGACAAAGGGTTCGAACTGGTCGATTCCGGCTC
GGCCGCCGCGCTGGACGGCTCGATCGCGCGGGCGGCGAACCGCAAGGAGGGCTGGCTGGGCTATTACTGGGCACCCACTG
CCATCTTGGGCCAGTATGACATGACCCGGCTGGAACTCGAGGCCGAATTCGACCGCGAGCGCTGGGACAATTGCATGGTC
AAGCCCGACTGCGTCGATCCGCAGGTGACGGAATGGCCGGTCTCGGACGTCTATACCGCCGTGACCAAGGAGTTCGCCGA
CAAGGCCGGCGTGGCCATGGATTACGTCAAGACCCGGGCCTGGAGCAACGAGACCGTCAACGCCATGCTGGCCTGGATGG
TCAAGAACCAGGCCAGCAACGAGGATGCCGCCTATGAGTTCCTCGAACGGCACGAGGACATCTGGACCGAATGGGTTCCC
GCCGAAGTGGCCGACAAGGTCAGGGCCGCCCTTTAA

Upstream 100 bases:

>100_bases
TCGCATCCGACCCGCGGAGGTGACCGGCGCTGAGCGCCGGTTGGTTTCGCCCCCTGCGCCGCTTCATGTGCGCGCATTGA
AAATCCGGAGAGAACGTTTG

Downstream 100 bases:

>100_bases
TCCGCGCCATCGCGCCTGACGGGCAAGGTCGCGGGTCGCGGCCTTGCCCATTTCCGTTTCCAAAGGACGAAAAGACATGG
ACCTGATCCGTTTCCCGGAA

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGKFLASTTLAFMALAVPAFAADEECGSITVAEMNWASAGLAAWVDKIILEEGYGCDVALVSGDTMPTFASMNEKAQPDM
APELWVNAVKEPLDQAVAEGRIVIASQILSDGGVEGIWVPTWLAEEHNIHTLKDALEHPELFPGAEDSSKGAWFGCPSGW
ACQAINRNQFVGSGAADKGFELVDSGSAAALDGSIARAANRKEGWLGYYWAPTAILGQYDMTRLELEAEFDRERWDNCMV
KPDCVDPQVTEWPVSDVYTAVTKEFADKAGVAMDYVKTRAWSNETVNAMLAWMVKNQASNEDAAYEFLERHEDIWTEWVP
AEVADKVRAAL

Sequences:

>Translated_331_residues
MGKFLASTTLAFMALAVPAFAADEECGSITVAEMNWASAGLAAWVDKIILEEGYGCDVALVSGDTMPTFASMNEKAQPDM
APELWVNAVKEPLDQAVAEGRIVIASQILSDGGVEGIWVPTWLAEEHNIHTLKDALEHPELFPGAEDSSKGAWFGCPSGW
ACQAINRNQFVGSGAADKGFELVDSGSAAALDGSIARAANRKEGWLGYYWAPTAILGQYDMTRLELEAEFDRERWDNCMV
KPDCVDPQVTEWPVSDVYTAVTKEFADKAGVAMDYVKTRAWSNETVNAMLAWMVKNQASNEDAAYEFLERHEDIWTEWVP
AEVADKVRAAL
>Mature_330_residues
GKFLASTTLAFMALAVPAFAADEECGSITVAEMNWASAGLAAWVDKIILEEGYGCDVALVSGDTMPTFASMNEKAQPDMA
PELWVNAVKEPLDQAVAEGRIVIASQILSDGGVEGIWVPTWLAEEHNIHTLKDALEHPELFPGAEDSSKGAWFGCPSGWA
CQAINRNQFVGSGAADKGFELVDSGSAAALDGSIARAANRKEGWLGYYWAPTAILGQYDMTRLELEAEFDRERWDNCMVK
PDCVDPQVTEWPVSDVYTAVTKEFADKAGVAMDYVKTRAWSNETVNAMLAWMVKNQASNEDAAYEFLERHEDIWTEWVPA
EVADKVRAAL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36173; Mature: 36041

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFLASTTLAFMALAVPAFAADEECGSITVAEMNWASAGLAAWVDKIILEEGYGCDVAL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEE
VSGDTMPTFASMNEKAQPDMAPELWVNAVKEPLDQAVAEGRIVIASQILSDGGVEGIWVP
EECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCEEEEC
TWLAEEHNIHTLKDALEHPELFPGAEDSSKGAWFGCPSGWACQAINRNQFVGSGAADKGF
EEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCC
ELVDSGSAAALDGSIARAANRKEGWLGYYWAPTAILGQYDMTRLELEAEFDRERWDNCMV
EEECCCCCHHHCCHHHHHCCCCCCCEEEEECCHHHHCCCCCEEEEEEHHHCHHHHCCCCC
KPDCVDPQVTEWPVSDVYTAVTKEFADKAGVAMDYVKTRAWSNETVNAMLAWMVKNQASN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
EDAAYEFLERHEDIWTEWVPAEVADKVRAAL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
GKFLASTTLAFMALAVPAFAADEECGSITVAEMNWASAGLAAWVDKIILEEGYGCDVAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEE
VSGDTMPTFASMNEKAQPDMAPELWVNAVKEPLDQAVAEGRIVIASQILSDGGVEGIWVP
EECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCEEEEC
TWLAEEHNIHTLKDALEHPELFPGAEDSSKGAWFGCPSGWACQAINRNQFVGSGAADKGF
EEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCC
ELVDSGSAAALDGSIARAANRKEGWLGYYWAPTAILGQYDMTRLELEAEFDRERWDNCMV
EEECCCCCHHHCCHHHHHCCCCCCCEEEEECCHHHHCCCCCEEEEEEHHHCHHHHCCCCC
KPDCVDPQVTEWPVSDVYTAVTKEFADKAGVAMDYVKTRAWSNETVNAMLAWMVKNQASN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
EDAAYEFLERHEDIWTEWVPAEVADKVRAAL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA