| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is spsG [H]
Identifier: 119386262
GI number: 119386262
Start: 699375
End: 700421
Strand: Direct
Name: spsG [H]
Synonym: Pden_3551
Alternate gene names: 119386262
Gene position: 699375-700421 (Clockwise)
Preceding gene: 119386261
Following gene: 119386263
Centisome position: 40.42
GC content: 69.53
Gene sequence:
>1047_bases ATGAGCCTGCCTCCGGTCGTTTTTCGTTGCACCGCCAACGCGCGGATCGGCATGGGCCATCTGGCGCGCTGCCGCGAGAT GGCGCGGGAACTGGGCGCGCGGGGGCAGGCCTGTCATATCGCGGGCCTGCCCGACAGCCTGCGCCAACCCGGCGACACGA TGCTTTTCGCAAGCTGGACACCGCTGCCCGAGGACGGTCCGGCGACGGAGGATGCGGCGCGGGTCGTCGCGCTTTGCCGC ACTGAGGGCACGCGGTATCTGGTGCTCGACGACTATCGCGGCGGCGATATCGCCTATCAGCAGGTGCTGGCCGATGCCGG ACTGCGCTGGCTGCAACAGTTCGATTCCTCGGGCGAGGGCGATTTCCTCGCGCCGATCCTTGTCAACGCCAGCCCCTATG AGCGGCCCGAGCAATATCGTCCCCGGCTGCGCAATCCCGAGACGCGGCTGCTGTTCGGGCCGCGCTATGCGGTGCTGCGG CCGGAATTCGCCCGCATCGCCGTGCGCGAGGACGGCCGGCCGGTGCGGCGCATCCTCGCGGCCTTCGGTGGCGGCGACGA CCGCGGCGCGCTCGACCTGGTGCTGGCGGCACTTGGCGACCTGCCGGACGTGGCGCTGCGGCTGGTTTCGGGGCGGGGCA ATCCGCGCAACGCGGAACTGGCCGCACGGCTGGCCGGCGTCGATCCGGCGCGGATCGAGCTGCTGGTCGATCCGCCCGCC ATGGCCGAACGCATCGCGGAATGCGATCTCGGCATCATCGCCGGCGGCACGATGAGCTACGAGTTGGCCCATTGCGGTCT GCCGATGCTGCTGGTGGCGCTGGCGCCGAACCAGCGGCGCTCCTGCCTCGGCTGGCAGGAGTTGACGGGCACCCCCTTTC TGGGCCAGATCGGGGACGTTATGCCCGATCGGTTGCGGGCGGAAGTTCATCGTTTTGTGACAGGGCCCGAACTGCGTCGC CAAGTGGCTGCGCGCGGCCGGGCAGAAGTGGATTGCAAGGGCGCGGCACGGCTGTGCGACGCCTTGATGGAAAGCGACAA AGCATGA
Upstream 100 bases:
>100_bases TCCTGCCGCGCGACCGTGCGCTCGATATCGATACGCCCGAGGACTGGGATTGGGCCGAGCGGTTGCTGGCCTTGCGCCAA GCCGCCGGGGAAATCCCGGC
Downstream 100 bases:
>100_bases CCAGAACCATTCTTATTCTCGGCACCAATGCCGGCCAGGCAGACTTGATCCGGCACATGAAGGACATCGGCTGGCGAGTG ATCGGCTGCGCGCCGGGCAA
Product: flagellin modification protein FlmD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSLPPVVFRCTANARIGMGHLARCREMARELGARGQACHIAGLPDSLRQPGDTMLFASWTPLPEDGPATEDAARVVALCR TEGTRYLVLDDYRGGDIAYQQVLADAGLRWLQQFDSSGEGDFLAPILVNASPYERPEQYRPRLRNPETRLLFGPRYAVLR PEFARIAVREDGRPVRRILAAFGGGDDRGALDLVLAALGDLPDVALRLVSGRGNPRNAELAARLAGVDPARIELLVDPPA MAERIAECDLGIIAGGTMSYELAHCGLPMLLVALAPNQRRSCLGWQELTGTPFLGQIGDVMPDRLRAEVHRFVTGPELRR QVAARGRAEVDCKGAARLCDALMESDKA
Sequences:
>Translated_348_residues MSLPPVVFRCTANARIGMGHLARCREMARELGARGQACHIAGLPDSLRQPGDTMLFASWTPLPEDGPATEDAARVVALCR TEGTRYLVLDDYRGGDIAYQQVLADAGLRWLQQFDSSGEGDFLAPILVNASPYERPEQYRPRLRNPETRLLFGPRYAVLR PEFARIAVREDGRPVRRILAAFGGGDDRGALDLVLAALGDLPDVALRLVSGRGNPRNAELAARLAGVDPARIELLVDPPA MAERIAECDLGIIAGGTMSYELAHCGLPMLLVALAPNQRRSCLGWQELTGTPFLGQIGDVMPDRLRAEVHRFVTGPELRR QVAARGRAEVDCKGAARLCDALMESDKA >Mature_347_residues SLPPVVFRCTANARIGMGHLARCREMARELGARGQACHIAGLPDSLRQPGDTMLFASWTPLPEDGPATEDAARVVALCRT EGTRYLVLDDYRGGDIAYQQVLADAGLRWLQQFDSSGEGDFLAPILVNASPYERPEQYRPRLRNPETRLLFGPRYAVLRP EFARIAVREDGRPVRRILAAFGGGDDRGALDLVLAALGDLPDVALRLVSGRGNPRNAELAARLAGVDPARIELLVDPPAM AERIAECDLGIIAGGTMSYELAHCGLPMLLVALAPNQRRSCLGWQELTGTPFLGQIGDVMPDRLRAEVHRFVTGPELRRQ VAARGRAEVDCKGAARLCDALMESDKA
Specific function: Unknown
COG id: COG3980
COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase
Gene ontology:
Cell location: Cell membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1062 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007235 [H]
Pfam domain/function: PF04101 Glyco_tran_28_C [H]
EC number: NA
Molecular weight: Translated: 37855; Mature: 37724
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPPVVFRCTANARIGMGHLARCREMARELGARGQACHIAGLPDSLRQPGDTMLFASWT CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCEEEEEECC PLPEDGPATEDAARVVALCRTEGTRYLVLDDYRGGDIAYQQVLADAGLRWLQQFDSSGEG CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DFLAPILVNASPYERPEQYRPRLRNPETRLLFGPRYAVLRPEFARIAVREDGRPVRRILA CEEEEEEECCCCCCCCHHHCCCCCCCCCEEEECCCCEEECCHHHEEEECCCCHHHHHHHH AFGGGDDRGALDLVLAALGDLPDVALRLVSGRGNPRNAELAARLAGVDPARIELLVDPPA HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEEEECCHH MAERIAECDLGIIAGGTMSYELAHCGLPMLLVALAPNQRRSCLGWQELTGTPFLGQIGDV HHHHHHHCCCEEEECCCCEEHHHHCCHHHHHHHHCCCCCCHHCCHHHHCCCCCHHHHHHC MPDRLRAEVHRFVTGPELRRQVAARGRAEVDCKGAARLCDALMESDKA CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SLPPVVFRCTANARIGMGHLARCREMARELGARGQACHIAGLPDSLRQPGDTMLFASWT CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCEEEEEECC PLPEDGPATEDAARVVALCRTEGTRYLVLDDYRGGDIAYQQVLADAGLRWLQQFDSSGEG CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DFLAPILVNASPYERPEQYRPRLRNPETRLLFGPRYAVLRPEFARIAVREDGRPVRRILA CEEEEEEECCCCCCCCHHHCCCCCCCCCEEEECCCCEEECCHHHEEEECCCCHHHHHHHH AFGGGDDRGALDLVLAALGDLPDVALRLVSGRGNPRNAELAARLAGVDPARIELLVDPPA HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEEEECCHH MAERIAECDLGIIAGGTMSYELAHCGLPMLLVALAPNQRRSCLGWQELTGTPFLGQIGDV HHHHHHHCCCEEEECCCCEEHHHHCCHHHHHHHHCCCCCCHHCCHHHHCCCCCHHHHHHC MPDRLRAEVHRFVTGPELRRQVAARGRAEVDCKGAARLCDALMESDKA CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]